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Domain assignment for ENSPCAP00000001613 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000001613
Domain Number 1 Region: 20-104
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 3.3e-31
Family SCAN domain 0.000085
Further Details:      
 
Domain Number 2 Region: 249-301
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000008
Family Classic zinc finger, C2H2 0.0036
Further Details:      
 
Domain Number 3 Region: 184-233
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000785
Family Classic zinc finger, C2H2 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000001613   Gene: ENSPCAG00000001736   Transcript: ENSPCAT00000001715
Sequence length 324
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_5611:493:13406:1 gene:ENSPCAG00000001736 transcript:ENSPCAT00000001715 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEIAGPVKQENSATTEGLALDSPWRRFRHFHLGDAPGPREALGLLRALCRDWLRPEVHTK
EQMLELLVLEQFLSALPIAVQAWVRSQRPQSGDEAVALLEELWXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXGDTVPVPEVPGTGDAQATQPCKQEPGSPPLVPSPSFLAAP
GSASCPECGKTGTKPEHLLRHQQSHSVEKPHTCPECGKAFRRKEHLRRHRGTHPGGLGPA
LRPLPARERPHACCECGKTFYWREHLVRHRKTHSGVRPFACWQCGKGFGRREHVLRHQRI
HGRAVSAQTPDPDTGGPFPAWPLG
Download sequence
Identical sequences ENSPCAP00000001613 ENSPCAP00000001613

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