SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000002574 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPCAP00000002574
Domain Number 1 Region: 529-585
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.49e-25
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 2 Region: 417-473
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.42e-24
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 3 Region: 584-641
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.76e-23
Family Classic zinc finger, C2H2 0.0053
Further Details:      
 
Domain Number 4 Region: 360-417
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.56e-22
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 5 Region: 640-696
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.04e-21
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 6 Region: 472-529
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.46e-21
Family Classic zinc finger, C2H2 0.0086
Further Details:      
 
Domain Number 7 Region: 305-361
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.22e-21
Family Classic zinc finger, C2H2 0.0074
Further Details:      
 
Domain Number 8 Region: 2-48
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.31e-17
Family KRAB domain (Kruppel-associated box) 0.0012
Further Details:      
 
Domain Number 9 Region: 196-247
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.93e-16
Family Classic zinc finger, C2H2 0.0087
Further Details:      
 
Domain Number 10 Region: 262-314
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000356
Family Classic zinc finger, C2H2 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000002574   Gene: ENSPCAG00000002768   Transcript: ENSPCAT00000002730
Sequence length 707
Comment pep:novel genescaffold:proCap1:GeneScaffold_7713:2259:9164:-1 gene:ENSPCAG00000002768 transcript:ENSPCAT00000002730 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ESVTFSDVVVTFTRDEWQLLSRTQKNLYWAVILENYSNLVSIGCRVSKRRDGLSRWEQHQ
PWTVLDTSHHGICSXXXXXXXXXXXXIWNVGDHALGPLQNESRMDIMEQSSEHKASENTV
HQQKTPFPLRKHGMFHLYGKAYMENVSLPMLNPSRTNAVKNSAECNTDEINSLHAIQELF
CTEMKFRDSQKSSRIKSQHIKHLKTLRIEEPHVCSDCGRAFSRKSLLIEHQVIHTGEKPY
RCSICGKASLKCSSLLNHHTIHKGQKPHKCLECDTAYVSKSKLSRHKKMHVAERPYICGD
CGKGYIWRSGLTVHQQVHSGRKPNICSECGKAFSEKRDLTIHQRTHTGEKPYVCNKCEKA
FTVNRQLITHHRIHTGEKPYVCSECGKAFTDRRKLSIHHRIHTGEKPYKCSECEKGFIQK
KSLTIHQRTHTGEKPYLCSECGKSFTQKGHLIVHQQTHTGEKPYICTTCGKAFTWNRDLT
IHQQIHTGKKPYICCQCQKGFLQNRDLTLHQRTHTGEKPYVCSECGKGFTQKGSLSTHQR
THTGEKPYVCSECGKGFTRKNYLIAHQRIHTGEKPYVCSECGKSFTRKDYLVTHHRIHTG
EKPYVCSECGKRFIEKGTLTVHRRTHTGQKPYKCPICGKAFTWNGSLTFHYQIHTGKKPY
KCQCGKAFIQKQDLTVHQRTHTGEKPYVCNECGRGFTRKGKLSTHLA
Download sequence
Identical sequences ENSPCAP00000002574 ENSPCAP00000002574

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]