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Domain assignment for ENSPCAP00000002757 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000002757
Domain Number 1 Region: 34-121
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 6.87e-36
Family SCAN domain 0.0000596
Further Details:      
 
Domain Number 2 Region: 441-498
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.27e-22
Family Classic zinc finger, C2H2 0.0072
Further Details:      
 
Domain Number 3 Region: 483-535
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.49e-21
Family Classic zinc finger, C2H2 0.008
Further Details:      
 
Domain Number 4 Region: 403-455
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.05e-16
Family Classic zinc finger, C2H2 0.0076
Further Details:      
 
Domain Number 5 Region: 219-249
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0000000418
Family KRAB domain (Kruppel-associated box) 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000002757   Gene: ENSPCAG00000002958   Transcript: ENSPCAT00000002930
Sequence length 546
Comment pep:known_by_projection scaffold:proCap1:scaffold_16968:1544:23617:-1 gene:ENSPCAG00000002958 transcript:ENSPCAT00000002930 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPVDLGLVLLPPLANAEDPPFPAPDAAPQRELSSSETARQLFRQFRYQVRSGPQETLRQL
RKLCFQWLQPEVHTKEQILEILMLEQFLTILPGEIQMWVRKQCPGSGEEAVTLVESLKGD
PRRLWQWISSQVLGQEISEKMDCSSCQVEEKESHLEVVPHEFGLQNSASQPAEQLSPTVK
EESDPEHELVVAASQCLARPEERLVRDQDFGASLLQASSQEQWKHLDSTQKEHYWDIMLE
AYGKMVSGADISSCKSDLANSAEHGQELARLHLRSREKISAHMCTXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHFGRQYLTEAQGSLQGEGRGEQLSTEE
GSSGKQPGQHLSDPHLGDLSLLWLKEKPEASQKGLLKPPVPQKLLTCKECGKTFYRNSQL
VFHQRTHTGEKYFQCHTCKKAFLRSSDFVKHQRIHTGEKPCKCSHCGKGFSDLSGLRHHE
KIHTGEKPYKCSICEKSFIQRSDFNRHQRVHTGEKPYKCSRCGKRFSWSSSLDKHRKSHL
AKKSSQ
Download sequence
Identical sequences ENSPCAP00000002757 ENSPCAP00000002757

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