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Domain assignment for ENSPCAP00000003655 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000003655
Domain Number 1 Region: 36-125
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 5.04e-36
Family SCAN domain 0.0000471
Further Details:      
 
Domain Number 2 Region: 583-640
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.4e-23
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 3 Region: 499-553
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.58e-20
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 4 Region: 629-681
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.09e-18
Family Classic zinc finger, C2H2 0.0023
Further Details:      
 
Domain Number 5 Region: 211-258
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0000000000196
Family KRAB domain (Kruppel-associated box) 0.0063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000003655   Gene: ENSPCAG00000003912   Transcript: ENSPCAT00000003897
Sequence length 683
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_1430:38071:51154:1 gene:ENSPCAG00000003912 transcript:ENSPCAT00000003897 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence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Download sequence
Identical sequences ENSPCAP00000003655 ENSPCAP00000003655

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