SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000004543 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPCAP00000004543
Domain Number 1 Region: 471-552
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 3.54e-29
Family Forkhead DNA-binding domain 0.0000152
Further Details:      
 
Weak hits

Sequence:  ENSPCAP00000004543
Domain Number - Region: 312-337
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0393
Family Classic zinc finger, C2H2 0.0097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000004543   Gene: ENSPCAG00000004821   Transcript: ENSPCAT00000004848
Sequence length 685
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_3440:202413:239488:1 gene:ENSPCAG00000004821 transcript:ENSPCAT00000004848 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MMVESASETIRSAPSGQNGVGSLSGQADGGGGGTGAGTGAASAAGGGAGRDAAPGADSNG
EMSPAELLHFQQQQAFQVARQFLLQQASGLSSPGNNDSKQSASAVQVPVSVAMMSPQMLT
PQQMQQILSPPQLQLLQQQQALMLQQLQEYYKKQQEQLHLQLLTQQQAGKQQPKEXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVCPTDLHQLWGESA
PGQPAEDSVKQEGLDLTGTAATATSFTTTPKVSPPLSHHTLPNGQPTVLTPRRDSSSHEE
TPNSHPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQCRVQMQVVQQLEIQL
AKESERLQAMMAHLHMRPSEPKPFSQPLNPVPGSSSFSKVAVSAADSFPDGLAHPPTSAA
APVTPLRPPGLGSAALHSGGPARRRSSSDKFCSPISSELAQNHEFYKNADVRPPFTYASL
IRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAV
WTVDEREYQKRRPPKMTGXXXXXXXXXXXXXXXXXXXXXXAALAESSFPLLNSPGMLNPG
STSSLLPLSHEDVGAPLEPLPSNGSSSPPRLSPSQYSHQVQVKEEPAEAEEDGRPGPPLG
APNASTVGPPEDRDLEEELPGEELS
Download sequence
Identical sequences ENSPCAP00000004543 ENSPCAP00000004543

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]