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Domain assignment for ENSPCAP00000004791 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000004791
Domain Number 1 Region: 42-131
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 2.93e-37
Family SCAN domain 0.0000457
Further Details:      
 
Domain Number 2 Region: 458-514
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.28e-26
Family Classic zinc finger, C2H2 0.0037
Further Details:      
 
Domain Number 3 Region: 654-710
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.21e-25
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 4 Region: 597-654
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.89e-25
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 5 Region: 402-458
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.49e-25
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 6 Region: 541-598
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.84e-23
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 7 Region: 695-747
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.11e-20
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 8 Region: 363-415
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.37e-17
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 9 Region: 504-536
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000234
Family Classic zinc finger, C2H2 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000004791   Gene: ENSPCAG00000005147   Transcript: ENSPCAT00000005115
Sequence length 758
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_3744:540:17955:-1 gene:ENSPCAG00000005147 transcript:ENSPCAT00000005115 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLAPSKRMTSSLCSQIFLMWKPDRTQTGPHNTEKETLASTLSRDTETCRQNFRNFPYPEL
SGPRKALSQLRELCLKWLRPEIHSKEQILELLVLEQFLTILPGEVRTWVKSQYPESSEEV
VTLVEDLVQILEEEAPRSSALFQETPEEDNHTFQAGWLNNLVTKXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXLTVYRPSVIPILEEPWLVIKEILEGPSPXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP
GEKPYKCNVCGKKFRKNSFLMKHQSTHAKEKSYECEECGKEFRHISSLIAHQRMHTGEKP
YECHQCGKAFSQRAHLTIHQRIHTGEKPYKCDDCGKDFSQRAHLTIHQRTHTGEKPYKCL
ECGKTFSHSSSLINHQRVHTGEKPYICNECGKTFSQSTHLLQHQKIHTGKKPYKCNECWK
VFSQSTYLIRHQRIHSGEKCYKCNECGKAFAHSSTLIQHQTTHTGEKSYICNMCGKAFSQ
SANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNVCGKAYRQGANL
TQHQRIHTGEKPYKCNECGKAFIYSSSLNQHQRTHTGERPYKCNECDKDFSQRTCLIQHQ
RIHTGEKPYACYICGKTFTQSTNLIQHQRVHMRVKHCN
Download sequence
Identical sequences ENSPCAP00000004791 ENSPCAP00000004791

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