SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000004887 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPCAP00000004887
Domain Number 1 Region: 468-519
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000464
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Weak hits

Sequence:  ENSPCAP00000004887
Domain Number - Region: 505-552
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0102
Family Classic zinc finger, C2H2 0.055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000004887   Gene: ENSPCAG00000005261   Transcript: ENSPCAT00000005216
Sequence length 791
Comment pep:known_by_projection scaffold:proCap1:scaffold_33304:7280:11709:-1 gene:ENSPCAG00000005261 transcript:ENSPCAT00000005216 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
DSNSPPRRGMQSKSQFRTIAPKIVPKVLTSRVLPYHSPSLCDHLNPGPSISCKPLVIPSQ
SYTLMQVAGQEGKFCLVALPHMASAQPIQKSRMPLPENLKLPIPRYQPPRSNKTSRKKSS
PSSPETSSSKPPLQIPVCPQTSCPQPIHLELPKKTVSSEQALSQDAAPAALPDGDGLRAS
GLPNTRGDVNPPAALRSAVSQELVGQDFTRISGTATSPSRKSSGKPSTAHLAKAMTSLSP
TVFGNPIQVISSVPKGKLPILPYSGMKTTEACKTEYTADSSLPGHKANYAKVSSILERFS
VAIRMADKVSVGQVGRQSPCDGAFCPAPKLDPNHKTKLNSVAARRRVRKRKLPDEILTFQ
GKRRKCIINKCRNSKERVKTDSQEARDQKPVKKYRSIMPKPVLVMPVLACLPSPARVLQS
QIPGSLEQGTVVNDPPTSKTHGGKQNDSPSAKPSFAFKNRRSGLKKPWHRCQVCNHHFEF
KQHLQDHLDLHANRRPYSCRICHKTYVRSGSLSSHMKLHHGESRPKRLMCCEFCAKVFGH
IRVYFGHLKEVHRVVISTESSPSDPQPSDAPKTGDPGVRGTESSLARESKSSLEEDLFLN
QVDEVKLQIKCGRCQITTQSFAEIKFHLLYVHGEEIQGRLQEGVLPESKGVQEELVKHAA
SYWKQCPKRRKLVKRYSSQEDLHMLTKQKRQLHHHQQNNMHIQIKNEGAQLRTAEPGEKP
QGPEQPTPNSILFCSLLGLHCLLCAQTLGGKEQLLRHWEQQHNCEDPSKLWTIFNAFSNQ
GVIEFSNEIEK
Download sequence
Identical sequences ENSPCAP00000004887 ENSPCAP00000004887

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]