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Domain assignment for ENSPCAP00000006706 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000006706
Domain Number 1 Region: 46-135
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.14e-37
Family SCAN domain 0.0000457
Further Details:      
 
Domain Number 2 Region: 381-438
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.59e-27
Family Classic zinc finger, C2H2 0.0036
Further Details:      
 
Domain Number 3 Region: 437-494
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.15e-26
Family Classic zinc finger, C2H2 0.0036
Further Details:      
 
Domain Number 4 Region: 348-395
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.23e-16
Family Classic zinc finger, C2H2 0.0061
Further Details:      
 
Domain Number 5 Region: 479-531
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000278
Family Classic zinc finger, C2H2 0.0075
Further Details:      
 
Domain Number 6 Region: 277-312
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000268
Family Classic zinc finger, C2H2 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000006706   Gene: ENSPCAG00000007168   Transcript: ENSPCAT00000007166
Sequence length 534
Comment pep:known_by_projection scaffold:proCap1:scaffold_43709:5596:10193:-1 gene:ENSPCAG00000007168 transcript:ENSPCAT00000007166 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RAMDSRALSTLVTQDPQEQELIVVKVEEGLSWGQKSKQDGSAQSCQEMFRQQFRKFCYKE
TPGPREALGRLHELCYQWLMPELHTKEQILELLVLEQFLSILPEELQVWVQQQSPKSGEE
AVTLLEDLEREFDDPRQQIPASLQCPAVPWKDVTSLGASQESTNIQLQPLQTQLKSWEPC
LSLRSGCEINESATKEEVLGEKSQGLIPKPVFREVSEHENCSEWQQGSATGEKLRRSPSQ
GDSFSQVVFTHESLGKRDHHDNPQKSMILNTNSVTYQKVHSDRPYRCDICGHSFTQHYTL
TQHQRIHTGEKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSECGKAFNQRSAL
IRHRIIHTGEKACICNECGKAFSQSSYLIIHQRIHTGEKPYKCNECGKAFSLSSNLIRHQ
RIHSGEEPYQCNECGKAFSQNSDLIIHQRIHTGEKPYKCNECGKAFSLSSNLIRHQRIHS
GKEPFQCNQCGKTFKRNSALTQHQRLHSKDEGYTCSEWEKAFRYRICHQRHTVE
Download sequence
Identical sequences ENSPCAP00000006706 ENSPCAP00000006706

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