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  Home > Genomes > Procavia capensis 76_1 > ENSPCAP00000007715

Domain assignment for ENSPCAP00000007715 from Procavia capensis 76_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000007715
Domain Number 1 Region: 1155-1212
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.2e-20
Family Classic zinc finger, C2H2 0.0072
Further Details:      
 
Domain Number 2 Region: 956-1012
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.02e-18
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 3 Region: 202-254
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.57e-18
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 4 Region: 649-705
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.29e-17
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 5 Region: 1727-1777
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000289
Family Classic zinc finger, C2H2 0.014
Further Details:      
 
Domain Number 6 Region: 1197-1249
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000529
Family Classic zinc finger, C2H2 0.014
Further Details:      
 
Domain Number 7 Region: 694-746
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000129
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 8 Region: 997-1049
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000024
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 9 Region: 179-211
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000016
Family Classic zinc finger, C2H2 0.0099
Further Details:      
 
Domain Number 10 Region: 1634-1687
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000141
Family Classic zinc finger, C2H2 0.021
Further Details:      
 
Domain Number 11 Region: 105-158
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000173
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number 12 Region: 47-94
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000131
Family Classic zinc finger, C2H2 0.018
Further Details:      
 
Weak hits

Sequence:  ENSPCAP00000007715
Domain Number - Region: 547-572
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000512
Family Classic zinc finger, C2H2 0.021
Further Details:      
 
Domain Number - Region: 264-298
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00225
Family Classic zinc finger, C2H2 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000007715   Gene: ENSPCAG00000008132   Transcript: ENSPCAT00000008245
Sequence length 1824
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_2984:2036:87176:1 gene:ENSPCAG00000008132 transcript:ENSPCAT00000008245 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
GVLTLNAENTNYAYQVPNFHKCEISLLSFPKESQQRHMRDLXXXXXXPHRCDQCPQTFNV
EFNLTLHKCTHNGEDPTIRVCNKKFSRVASLKAHIXXXXXXXNLICSECGDEFTLQSQLA
IHMEEHRQELAGRRAHTCKACKKEFETSAQLKEHMKTHYKIMVSGTRSYNRNIDRSGFTY
SCPHCGKTFQKPSQLTRHIRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAF
CPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNTAS
AAETAHVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXQALENSGLSSIPVAAHPNDPSHTKTSTTQIQSPDIANVSGEQA
EPADAEQEKEQESPEKLDKKERKIIKKKSPFLPXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXVRPFACPHCDKKFRTSGHRKTHIASHFKHTELRKMRHQRKPAKVRVGKANSLVPD
IPLQEPILITDLGLIQPIPRNQFFQNYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIR
SHTGEKPFKCSQCGRGFVSAGVLKAHIRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNN
LRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQAASIDDSTVDQQSIHVSTQMQ
VEIESDALPQAAEAVAANAEAILELEPQHVVGTEEAALSQPLADQPLEADEDRFVTPQHP
LQGHIDQFEQQTPAAQAFEPAALSQGFTVTDTYSQQTQFTPVQQLQDSSTLESQALSTSF
HQLQVPSSDTISVTTRLIQESSQEELDMQTQRPQFLEDNEDHTRRSYRCDYCNKGFKKSS
HLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCNASFTTNGSLTR
HMATHMSMKPYKCPFCEESFRTTVHCKKHMKKHQMVPSAVSAAGESEGGEVYMEEEEESP
ERNTSRKSRPEVITFTEEETAQLAKIRPRESATVSEKVLVQSAAEKDRISEMKDKQAELE
AEPKYANCCTYCPKSFKKPSDLVRHVRIHTGEKPYKCDECGKSFTVKSTLDCHVKTHTGQ
KLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPRK
ARRPATRTSPEGLPPVNVLNTSSSDPNVFIMNNSVLTGQFDQNLLQQGLVGQALLPASMS
AGGDLTVSLTDAGLATLEGIQLQLAANLVGPNVQISGIDASSINNITLQIDPSLLQQTLQ
QGNVLTQQLTGDPGLTPQSGSLQTPDSTVPASVVIQPISGLSLQPSVTSANLTIGPLSEQ
DSVLTTTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXLTTTPGSLPSTTPMSPSTIATQNLVMASSGVGGDASVTLTLADTQGMLSG
GLDTVTLNITSQGQQFPALLTDPSLSACGAGSPQVILVXXXXXXXXXXXXXXXXXVTDVS
PSLAKGSPPEKEGRAHQCLECSRAFSSAAMLLHHSKEVHGRERIHACQLCNKAFKRATHL
KEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQXXXXXXXXXXERPFRCTLCEKAFNQ
KSALQVHMKKHTGERPYKCACCAMGFTQKSNMKLHMRRAHSYAGSLQDTASHPEQDGTEL
GQTLRLEEVVQESAGEWQALANVF
Download sequence
Identical sequences ENSPCAP00000007715 ENSPCAP00000007715

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.