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Domain assignment for ENSPCAP00000007834 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000007834
Domain Number 1 Region: 46-131
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.24e-35
Family SCAN domain 0.0000888
Further Details:      
 
Domain Number 2 Region: 642-699
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.01e-26
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 3 Region: 474-531
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.18e-24
Family Classic zinc finger, C2H2 0.0053
Further Details:      
 
Domain Number 4 Region: 586-643
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.87e-24
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 5 Region: 530-587
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.02e-23
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 
Domain Number 6 Region: 418-475
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.47e-22
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 7 Region: 684-736
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.26e-21
Family Classic zinc finger, C2H2 0.0036
Further Details:      
 
Domain Number 8 Region: 380-432
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.62e-20
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 9 Region: 224-278
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0000628
Family KRAB domain (Kruppel-associated box) 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000007834   Gene: ENSPCAG00000008405   Transcript: ENSPCAT00000008381
Sequence length 753
Comment pep:novel genescaffold:proCap1:GeneScaffold_7070:11137:20473:1 gene:ENSPCAG00000008405 transcript:ENSPCAT00000008381 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MATEDGGILGITPRVPVFQKQEGHLGVKQEPESHPWGQSCSLQKNHPPVCEIFRLHFRQL
CYHEMSGPQEALSRLRELCHWWLMPEVHTKEQILELLVLEQFLSILPGELRTWVQLHRPG
SGKEAVAVVEFQRHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTFASPVPALPKAGNSGDHAVTSVLRMVRTQDSAAYEDLSVDHT
QKWKGPVLGQRALYRNMMLGSYHSMASWAGENRMKSLELIPKKEISKGPASSDKTSGGGL
HGMVPGASEVGHAFEDALKNEEEQSSDKEGSSTESNFLEITDENKKNSTKDKCEKYKEQG
EPFNLSSSTAEYQEILKAQKFYQCDECGRAFSRSSHLTGHQRIHTGEKPYKCSECGKTFR
QTSQLFVHLRIHTGEKPYECNGCGKTYRHSSHLIQHQKLHDGEKPYKCNECAKAFTQSSQ
LIDHQRTHTGEKPYECSKCGEAFIRSKSLARHQVLHTGEKPYKCNECGKAFCSSRNLTDH
QRIHTGEKPYECNECGKAFSRSKCLIRHQSLHSGEKPYKCSECGKAFNQNSQLVDHERMH
TGEKPFECSECGKAFSLSKCLIRHQRLHTGEKPYKCKECGKSFNQNSHLIIHQRIHTGEK
PYECNECGKVFSYSSSLMVHQRTHTGEKPYKCNNCGKAFSDSSQLIVHQRVHTGEKPYEC
SECGKAFSQRSTFNHHQRTHSGEKHSSLPRPAS
Download sequence
Identical sequences ENSPCAP00000007834 ENSPCAP00000007834

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