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Domain assignment for ENSPCAP00000008084 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000008084
Domain Number 1 Region: 39-131
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 8.7e-39
Family SCAN domain 0.0000505
Further Details:      
 
Domain Number 2 Region: 468-517
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.52e-18
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 3 Region: 394-446
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.68e-17
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000008084   Gene: ENSPCAG00000008668   Transcript: ENSPCAT00000008649
Sequence length 520
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_5487:9737:16251:-1 gene:ENSPCAG00000008668 transcript:ENSPCAT00000008649 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAKTLEPEDQDLWEEEGILMVKLEDDFSCRPESILQRDDPVLETSHQNFRRFRYQEAASP
REALIRLRELCHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTL
VEGLQKQPRRPRRWVTVHVHGQEVLSEESLHLEAEPELLSELQDCVQTSVPKDSHEETRQ
SPDLGELKEQSPGPEEEFQPLQENEASVLQDPDLPEERNTRDPEMVALLTALSQXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPIPRLDEISQVREEESWVPDI
QEPQEPQEPEILSFTYTGDQSEEEEYLEQEHLCVEDLQRSILGHPQIHQTPDWEIVFEDS
PGRLDERRFGTSISQENSCENLQETLPHHPLLGRHHDCTVCGKSFTCNSHLVRHLRTHTG
EKPYKCMECGKSYTRSSHLARHQKIHKMGASYKFPLNRKNVDETSPLIPPKRTPRIEKPY
RCDDCGKHFRWASDLVRHQRTHTGEKPFFCTICGKSFSQK
Download sequence
Identical sequences ENSPCAP00000008084 ENSPCAP00000008084

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