SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000008445 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPCAP00000008445
Domain Number 1 Region: 1865-1939
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.18e-35
Family Classic zinc finger, C2H2 0.0000366
Further Details:      
 
Domain Number 2 Region: 2043-2093
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000142
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 3 Region: 2291-2339
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000407
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Weak hits

Sequence:  ENSPCAP00000008445
Domain Number - Region: 535-646
Classification Level Classification E-value
Superfamily beta-sandwich domain of Sec23/24 0.000126
Family beta-sandwich domain of Sec23/24 0.048
Further Details:      
 
Domain Number - Region: 1998-2051
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00198
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number - Region: 1459-1484
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00788
Family Classic zinc finger, C2H2 0.034
Further Details:      
 
Domain Number - Region: 438-492
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0238
Family Classic zinc finger, C2H2 0.025
Further Details:      
 
Domain Number - Region: 884-914
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0377
Family Classic zinc finger, C2H2 0.045
Further Details:      
 
Domain Number - Region: 841-869
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0774
Family Classic zinc finger, C2H2 0.03
Further Details:      
 
Domain Number - Region: 1104-1145
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0834
Family Classic zinc finger, C2H2 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000008445   Gene: ENSPCAG00000008981   Transcript: ENSPCAT00000009046
Sequence length 2449
Comment pep:known_by_projection scaffold:proCap1:scaffold_86:97438:191837:1 gene:ENSPCAG00000008981 transcript:ENSPCAT00000009046 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence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Download sequence
Identical sequences ENSPCAP00000008445 ENSPCAP00000008445

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]