SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000008483 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPCAP00000008483
Domain Number 1 Region: 306-362
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.64e-21
Family Classic zinc finger, C2H2 0.0049
Further Details:      
 
Domain Number 2 Region: 184-236
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.57e-19
Family Classic zinc finger, C2H2 0.0049
Further Details:      
 
Domain Number 3 Region: 115-163
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.06e-19
Family Classic zinc finger, C2H2 0.0049
Further Details:      
 
Domain Number 4 Region: 444-496
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.02e-18
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 5 Region: 537-588
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.28e-17
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 6 Region: 267-319
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.99e-17
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000008483   Gene: ENSPCAG00000009103   Transcript: ENSPCAT00000009087
Sequence length 613
Comment pep:known_by_projection scaffold:proCap1:scaffold_5285:28034:32680:1 gene:ENSPCAG00000009103 transcript:ENSPCAT00000009087 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MERAVEPWGPDLPGPEEREQLRGARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXEGIQTWDDWVREGLGKQQDRGPRLLGEPHWGQTSDRAAVCGECGKFRQMSD
LVKHQRTHTGEKPYKCGVCGKGFGDSSARIKHQRTHSGEKPYKARPPNQGPPKIPRPRIP
AGERPTICGECGKSFRQSSDLVKHQRTHTGEKPYKCGICGKGFGDSSARIKHQRTHRGEQ
PSRPVVPRRRLSRTTTAAAQGPKVQDKPYICTDCGKRFVLSCSLLSHQRSHLGPKPFGCD
VCGKEFARGSDLVKHLRVHTGEKPYLCPECGKGFADSSARVKHLRTHSGERPHACPECDR
TFSLSSTLLRHRLTHMEPQDFGFPGYPLAPLIPSPPPPPLGTSPPLTPRSPPHSGDGPFG
LPGLEPEPGGPQAGEPPPPLAGDKPHKCPDCGKGFRRSSDLVKHHRVHTGEKPYLCPECG
KGFADSSARVKHLRTHRGERARPPSPSTLLRPHNPPGPPPTAPRPRVRAQPSGPSQPHVC
GFCGKEFPRSSDLVKHRRTHTGEKPYKCAECGKGFSDSSARIKHQRGHLVLRPFGTGDGR
ARPLKEEPPTELE
Download sequence
Identical sequences ENSPCAP00000008483 ENSPCAP00000008483

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]