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Domain assignment for ENSPCAP00000008938 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000008938
Domain Number 1 Region: 43-126
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 3.89e-28
Family SCAN domain 0.00013
Further Details:      
 
Domain Number 2 Region: 369-420
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.44e-19
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 3 Region: 453-504
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.45e-17
Family Classic zinc finger, C2H2 0.0063
Further Details:      
 
Weak hits

Sequence:  ENSPCAP00000008938
Domain Number - Region: 412-440
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0417
Family Classic zinc finger, C2H2 0.039
Further Details:      
 
Domain Number - Region: 285-307
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.066
Family Classic zinc finger, C2H2 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000008938   Gene: ENSPCAG00000009599   Transcript: ENSPCAT00000009579
Sequence length 509
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_4282:3841:18649:1 gene:ENSPCAG00000009599 transcript:ENSPCAT00000009579 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQPLKELMAISKPQNLALCKKSEVLRADVSPQKKAIQIMEVYDSEASRQKLRQFQYLEVA
GPHESLSQLWELCVQWLRPEIHTKNQILELLVLVQFLRKEVRTWVKLQHPKSSKKVVTLL
EDMMGMLKVENLCCKDSVLQKETIKKEETETDSMTGIYQXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREII
SGEESLQEMVMTNTLSYLSSWKDDDWLYKSQENQDMYLPQETFFQKAIHTEERDFKCAEY
EESFNVMAVNSIYNIQKGISARKESPKCYKFKDNFGFNLDSVDKQHSEYNECGNTDSMQQ
QETHTTMNSYECYQCGKAFSRSSSLIRHQVTHTGEKPYKCSECGRFFNRLTNLNRHQKIH
TKAKIYESSGCEYAFSTNKDSNKNQVLYSVNNPYECVDCGKSFNRSSSLIRHQMIHTQEK
PFNCKECEKTFFRRPNLIKHQKLHAEKYY
Download sequence
Identical sequences ENSPCAP00000008938 ENSPCAP00000008938

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