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Domain assignment for ENSPCAP00000009201 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000009201
Domain Number 1 Region: 42-132
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 6.87e-38
Family SCAN domain 0.0000571
Further Details:      
 
Domain Number 2 Region: 392-449
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.74e-23
Family Classic zinc finger, C2H2 0.0031
Further Details:      
 
Domain Number 3 Region: 337-393
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.68e-21
Family Classic zinc finger, C2H2 0.003
Further Details:      
 
Domain Number 4 Region: 434-486
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.87e-20
Family Classic zinc finger, C2H2 0.0037
Further Details:      
 
Domain Number 5 Region: 285-338
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.95e-19
Family Classic zinc finger, C2H2 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000009201   Gene: ENSPCAG00000009915   Transcript: ENSPCAT00000009862
Sequence length 493
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_6855:4108:11717:-1 gene:ENSPCAG00000009915 transcript:ENSPCAT00000009862 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLGESTALASHVPKEQEGLIIVKVEEENDVWGQEFGLAGSQHSQEILRQQFRQFGYSDSS
GPREALSRLRELCRQWLRPETHSKEQILELLVLEQFLSILPEELKAWVQERRPGSGEEAV
SLLEELEKELDEPRLQGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXDKIVADRMLTANQEIIECITSAALTSPGRLPGKTPSGQIGEETLGISYNFENQTG
NAARNNLSQLPSQETHFSMATFNKRISTKETVLEYNHSEGNLNLNSNVTAKQRIHSREKL
FKCFDCGKAFLQNSKLIRHQRSHTGERPYACKECGKAFSLSSDLVRHKRIHSGEKPYKCC
ECGKAFRGSSELIRHRRIHTGEKPYKCKCGKAFSRRSALIQHDRIHTGDKGYECNQCGKA
FGRSSILIEHQRIHTGEKPYKCIECEKSFNQSSALTQHQRIHTGEKPYECSECRKTFRHR
SGLMQHHRTHTRV
Download sequence
Identical sequences ENSPCAP00000009201 ENSPCAP00000009201

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