SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000009267 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPCAP00000009267
Domain Number 1 Region: 509-562
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.82e-18
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 2 Region: 2-56
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 7.45e-18
Family KRAB domain (Kruppel-associated box) 0.0019
Further Details:      
 
Domain Number 3 Region: 468-519
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.36e-18
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 4 Region: 371-428
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000462
Family Classic zinc finger, C2H2 0.0097
Further Details:      
 
Domain Number 5 Region: 418-449
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000124
Family Classic zinc finger, C2H2 0.027
Further Details:      
 
Domain Number 6 Region: 313-367
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000132
Family Classic zinc finger, C2H2 0.025
Further Details:      
 
Weak hits

Sequence:  ENSPCAP00000009267
Domain Number - Region: 276-324
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00426
Family Classic zinc finger, C2H2 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000009267   Gene: ENSPCAG00000009928   Transcript: ENSPCAT00000009929
Sequence length 586
Comment pep:novel scaffold:proCap1:scaffold_7493:32378:48008:-1 gene:ENSPCAG00000009928 transcript:ENSPCAT00000009929 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ASVSFKDVVVQEEWQHMGSAQSTLYRDVMLENYSHLISVGYCITKPEVIFKLEQGEDPWF
LEESPNHSYPGNYKVYVYFKGSKRNEVQCLWEVISFNNKILMRGGDKILEKPVNPGTASF
SRKNDCKCHSCKIGFPVVSEFIMSNRSSSGKNADHIAICKKLHLDVNNEGSHVGEESYEY
NKNMKGLLYREDLSQDQKFILEEAFEYNDFEKGSCDKAASFTPESSHIGEKPSKDNKFSR
RNSMVERSFGLNHFVKSCEKSTLMECNKVHVALSHCECNENGNNFSMKFQLTQPLRSITG
HNTFDKNTCEGNFRQTSPSVVHQRAPTGDKSLDYNEFVSSFYSKLYLTVHEEADIEEKPY
KYDEHRKHRKSFSQKVNIIQHPRIYSGEKLCEYKECRKSFCQKPHLIQHHGTHMHIQLYE
CNNCGKRFCQQSSLSEHLSTHKKENHYEHDDGKSYKRLLLKGHLKTVTEKKLFKCNECGE
VFVPSSALRPHQRIHTGEKPYKCNECVKTFSQKSHLSRHKTVHTGEKPYQCSECGKTFSC
KTQLRGHRIHPGEKPYYCHECGFTQNSPPVLRIPEKERYEWDDGKA
Download sequence
Identical sequences ENSPCAP00000009267 ENSPCAP00000009267

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]