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Domain assignment for ENSPCAP00000009528 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000009528
Domain Number 1 Region: 23-109
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 3.52e-35
Family SCAN domain 0.0000212
Further Details:      
 
Domain Number 2 Region: 383-434
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000146
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 3 Region: 213-247
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000000000745
Family KRAB domain (Kruppel-associated box) 0.0026
Further Details:      
 
Domain Number 4 Region: 329-360
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000118
Family Classic zinc finger, C2H2 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000009528   Gene: ENSPCAG00000010237   Transcript: ENSPCAT00000010207
Sequence length 443
Comment pep:known_by_projection scaffold:proCap1:scaffold_82151:7068:11100:1 gene:ENSPCAG00000010237 transcript:ENSPCAT00000010207 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPSPLGPLRLTPMSPTATLEEIEAARLSFRQFRYQEAAGPHEAVTRLRDLCHQWLRPEVR
SKEQLLELLVLEQFLGVLPPEIQAWVREQLPGSPEEAVALVEELQHDPGRLLGWITTHVL
GREVPPAAQKTEESSASPLPSGTVESSSAAPGDGPPVAQMEGPAQLICSVKEEPDTDGQE
MAPSGPPLPAQSPERHLELQKPASTSFLPPRIQEEWGLLDPSQKELYWDAMLEKYGTVVS
LGMPPPTEAHNLAQLGALHAGTGSHPGLRPGDEGGSPHEAPPGCTEAQPPWGPPLCWPAA
TSTPCARPGTSPGPGPGSGPGPEPSVLRRKAYTCEQCGRGFDWKSVFVIHRRAHAGGQPA
TGDAGRPPPNHREPLRYPRRAPTGTHSYPCEECGRSFSWKSQLVIHRKSHIGQRRHFCSD
CGCGFDWKSQLVIHRKSHRPEAP
Download sequence
Identical sequences ENSPCAP00000009528 ENSPCAP00000009528

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