SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000011577 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSPCAP00000011577
Domain Number - Region: 149-177
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000124
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number - Region: 186-210
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0096
Family Classic zinc finger, C2H2 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000011577   Gene: ENSPCAG00000012434   Transcript: ENSPCAT00000012393
Sequence length 221
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_1598:69649:215260:-1 gene:ENSPCAG00000012434 transcript:ENSPCAT00000012393 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
FPTLADLIEHIEDNHIDTDPRVLEKQELQQPTYVALSYINXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXHSSGSLTPPVTPPITPSSSFRSSTPTGSEYDEEEVDYEES
DSDESWTTESAISSEAILSSMCMNGGEEKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQI
RVRKPFKCRCGKSYKTAQGLRHHTINFHPPVSAEIIRKMQQ
Download sequence
Identical sequences ENSPCAP00000011577 ENSPCAP00000011577

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]