SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000012398 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPCAP00000012398
Domain Number 1 Region: 12-122
Classification Level Classification E-value
Superfamily POZ domain 3.18e-24
Family BTB/POZ domain 0.0011
Further Details:      
 
Domain Number 2 Region: 483-535
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000533
Family Classic zinc finger, C2H2 0.017
Further Details:      
 
Domain Number 3 Region: 342-390
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000325
Family Classic zinc finger, C2H2 0.061
Further Details:      
 
Domain Number 4 Region: 1070-1117
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000125
Family Classic zinc finger, C2H2 0.029
Further Details:      
 
Domain Number 5 Region: 453-498
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000459
Family Classic zinc finger, C2H2 0.038
Further Details:      
 
Weak hits

Sequence:  ENSPCAP00000012398
Domain Number - Region: 1123-1153
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0079
Family Classic zinc finger, C2H2 0.071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000012398   Gene: ENSPCAG00000013307   Transcript: ENSPCAT00000013269
Sequence length 1195
Comment pep:known_by_projection scaffold:proCap1:scaffold_28821:17551:21457:1 gene:ENSPCAG00000013307 transcript:ENSPCAT00000013269 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTVMSLSRDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTKFKAHSNVLAASSLYFKN
IFWSHTICISSHVLELDDLKAEVFTEILNYIYSSTVVVKRQETVTDLAAAGKKLGISFLE
DLTDHSFSNSPGPYVFCITEKGVVKEEKNEKRHEEPAITNGPRITNAFSIIETENSNNMF
SPLDLRASFKKVSDSMRTGALCLERPDVCHEAEPVRTLAEHSYAVSSVAEAYRSQPACDH
DSSSPAPTGQENSEAPAAKPKPCRKPKTVPAPDSDSPPENRPPSPAATPEVNPERSPEPA
ADLSQAESPHHAGDVPVPREEENQSPEDVPGPPPEAEIPPLVYNCSCCSKSFESSALLNA
HMQLHKPTQEPLVCRHCNKQFTTLNRLDRHEQLCMRSDHVPMPGGNAHFLENYPTIGQNG
AAFTGPDPLLPENRIGDFPNSGSTLPEMEHIVKFVNGQMLYSCVVCKRSYVTLSSLRRHA
NVHSWRRTYPCHYCNKVFALAEYRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFH
AIDHRLSISKKTANGGLKPSVYPYKLYRLLPMKCKRAPYKSYRHSSYENARENSQVNEPV
PGTYVVQNAHSSELPALSFQDSVNTLTASPAVPAEALAAQDTPTSGGAQKAEGAEWGEGP
LKADLDSHLCATEVSVSSTENAAGSERQPGAAPVLPVSNGGEKSASVISYGGSAPSVIVH
SSQFSSVIVHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYCSKASRSNE
TMKIHERIHTGEKRYHCQFCLQSFLYLSTKRNHEQRHVLEHNGKGYACFQCPKICKTAAA
LGMHQKKHLFRSPSQQEKMEGDLYQENSDPWENPVDSEDNDQKDPVHAVADSVAL
Download sequence
Identical sequences ENSPCAP00000012398 ENSPCAP00000012398

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]