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Domain assignment for ENSPCAP00000013053 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000013053
Domain Number 1 Region: 477-529
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.3e-19
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 2 Region: 386-442
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.43e-17
Family Classic zinc finger, C2H2 0.0084
Further Details:      
 
Domain Number 3 Region: 569-621
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000124
Family Classic zinc finger, C2H2 0.0091
Further Details:      
 
Domain Number 4 Region: 528-584
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000294
Family Classic zinc finger, C2H2 0.02
Further Details:      
 
Domain Number 5 Region: 347-399
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000145
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Weak hits

Sequence:  ENSPCAP00000013053
Domain Number - Region: 460-479
Classification Level Classification E-value
Superfamily Rad50 coiled-coil Zn hook 0.0615
Family Rad50 coiled-coil Zn hook 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000013053   Gene: ENSPCAG00000014001   Transcript: ENSPCAT00000013969
Sequence length 716
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_6196:54507:59632:1 gene:ENSPCAG00000014001 transcript:ENSPCAT00000013969 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEEVEELLLDGKRSRLATKPHTAPDAEWSPFREGCAQDLKDFPPKLARTVLALKSLPLGL
ALGPSLAREQRLGIWCVGEPLKPGLQWGPLEEKPVSEEKGEQEDTHQEKDLSLGPWQDIC
ACEQGSGWTSLVQQGRQESEGNVAPLRVGRRLHLQVYRPVLPGFELLLWPWPPSDDSSTT
LPRLEGQTSVAVLTEVESAVQQEGVSPEQDAAEPCTDVGHQWHSNPQAESTVSPGLTPQA
QEHLSVGSQLLGSLLRDGSVDEEDPPQTLVPAEPQSSPAVQQGPASSETSSSPSRDPQCL
ADMAKSFCSPSDQHPPKAKTSEPKDFSIPAPLQSSPALASRSSRQGRRYRCGECGKAFLQ
LCHLKKHAFVHTGHKPFLCTECGKSYSSEESFKAHMLGHRGVRPFPCPQCDKAYGTRRDL
KEHQVVHSGARPFACDQCGKTFARRPSLRLHRKTHQVPAAPAPCPCPVCGRPLANQGSLR
NHMRLHTGEKPFLCPHCGRAFRQRGNLRGHLRLHTGERPYRCPHCADAFSQLPELRRHLI
SHTGEAHLCPVCGKALRDPHTLRAHERLHSGEKPFVCPQCGRAYTLATKLRRHLKSHLAD
KPYRCPTCGMGYTLPQSLKRHQLSHQPEASSSPPSVPPAASEPTMVLLQTEPELLDASSE
QEASPAQDVIEVTISESQNKCFVVPEEPGPTHSLLLIHKDMGFSAWAEVVEMETGT
Download sequence
Identical sequences ENSPCAP00000013053 ENSPCAP00000013053

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