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Domain assignment for ENSPCAP00000013489 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000013489
Domain Number 1 Region: 1909-1963
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000053
Family HkH motif-containing C2H2 finger 0.036
Further Details:      
 
Domain Number 2 Region: 993-1076
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000538
Family Canonical RBD 0.0031
Further Details:      
 
Domain Number 3 Region: 664-707
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.000000706
Family Canonical RBD 0.013
Further Details:      
 
Weak hits

Sequence:  ENSPCAP00000013489
Domain Number - Region: 425-463
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00152
Family Classic zinc finger, C2H2 0.076
Further Details:      
 
Domain Number - Region: 894-935
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00616
Family Canonical RBD 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000013489   Gene: ENSPCAG00000014342   Transcript: ENSPCAT00000014435
Sequence length 1969
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_700:4610:64738:1 gene:ENSPCAG00000014342 transcript:ENSPCAT00000014435 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSRPRFNPRGNFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRYYSAGRARGIPHRFAGHES
YPNVGPQRMNVQVTQHRTDPRLTKEKLDFHEVQQKKGKPHGGRWEDESHMSASVGVKQSS
VAQATEQSPKVQSRYTKESASSILASFGLSNEDLEELSRYPDEQLTPENMPLILRDIRMR
KMGRRLPNLPSQSRSKEALGGEAVSSNVIDYGHASKYGYTEDPLEVRIYDPEIPTDEVES
EFRSQQSVSSSVPASNVMCNSMFPVEDVFRQMDFPSESSNNQSYFSVESGTKMSGLHISG
GQSVLEPVKSGGQRISQTVSQTSSQSLITPSMNQQPFSSELISTVSQQERISHEPAMNSS
NVHVGSGGSKKNYQSEEDAPIQSPFGIVKASWLPKFSHADAQKMKRLPTPSMMNDYYAAS
PRIFPHLCSLCNVECSHLKDWIQHQNTSTHIESCRQLRQQYPDWNPEILPSRRSEGGRKE
DPTARRRSHSPTPRRSRRSSSSHRFHRSRSPIRYIYRPRSRSPRIYHRFFPRYRSRSRSP
NPAYRIRVPFSPECYRLLRSERTSRRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XPRKDQSLNYGSVLVVSELPEDSCTEEDIRKVFQPFGKVSDILIVPYRKEXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNREVKKKTSDSKKTSASALKYYVDSSKAV
ETVTSTSTAKSGQMKTSAKVNKSSGKSASSVKSVVTVAAKGNKASVKTXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEEMC
VVIVSDLPIKGYSVEDVYNLAKPFGGLSDILILSSHKKXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXEAIFTTLIKESNPEANTDEGYSRFVHLDNLPEDGLQCVL
CIGLQFGKVDHHIFINNKNKAILQLDSPESAQSMYNFLKQNPQNIGDYVLTCTLSPKVDS
SEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXEVETQEEEIIMEIHLVVSATGSIELFEAVEESTLNQQLYT
TDCEKKQEAEVVNCETEFSVSDYTLIEERNIKGILEESPSEAEDFFSGMSQSVVEAVAEV
DKHETVSKRVSPICLVALVPEISIGDENAMSRKGISEKSHIDEKGENEFITKETAVDLQI
GTEKAEMNKTGMVAEKLEKTVAGMKEKLSENTVTKAYPSKGVSQASKVDETSKINVPTPS
NVSGSKSAIKAAVVSSPKAKTTASKTENQKSFLKSVLRDQINAEKKLAAKELGLLKPTNV
GSGLGESSSKSKFIQSGLTRGGSGRISALQGKDSKLDYRDITKQSQETETRPSVMKRDDS
STKTSAGQNTKNSKSTTGRNSKSKEEPLFPFNLDEFVTVDEVIEEVSPAQAKQNPPKRKE
ALKSAPSSDLDLKKRGKSSAPHVAEELSFVTLDEIGEEEDAAAHLAQALVTVDEVIDEEE
LNVEEMVKNSNSLLTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERLVTVDEIGEV
EELPLNESTDITFDALNTKVDEGNTVTDPIGFISSQMPEDPSALVTVDEIQDENNDLHLV
TLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGENDLKVELAQSKNDHPTGKKGER
KRRPVDTKKTKPALSEEGQVNEDVKDEDLKAMLESHLAAKTPTKRVRIEKTPPSEEAVTA
EPAKGEEVFKISEEADEESGLSDSEPEQKRQKIEDSSLSNSVEADVSADLDFLVPKAGFF
CPICSLFYSGEKAMINHCKSTRHKQNTEKFMAKQRKEKEQNEAEERSSR
Download sequence
Identical sequences ENSPCAP00000013489 ENSPCAP00000013489

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