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Domain assignment for ENSPCAP00000013830 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000013830
Domain Number 1 Region: 8-96
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 2.47e-35
Family SCAN domain 0.0000663
Further Details:      
 
Domain Number 2 Region: 413-469
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.2e-22
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 3 Region: 454-506
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.05e-19
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 
Domain Number 4 Region: 358-414
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.16e-19
Family Classic zinc finger, C2H2 0.0098
Further Details:      
 
Domain Number 5 Region: 319-371
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.9e-18
Family Classic zinc finger, C2H2 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000013830   Gene: ENSPCAG00000014814   Transcript: ENSPCAT00000014802
Sequence length 518
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_7108:104036:113678:1 gene:ENSPCAG00000014814 transcript:ENSPCAT00000014802 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PWGKGKEDSSPETFRLRFRQFRYQEEARPQEALRELQELCHQWLRPELHTKEQILELLVL
EQFLAILPREFYAWIREHCPESSKALVAMMEDMTERALEAKAVPCHLQGEQDETALCRGP
WEPGVHLGPVEVKPEWGLPHGEGVQGLGESTEEHLNQDPGDGTQAFQEQXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXIGSKDKEAKTQQEDLKGPLAGLTSERFGEAVLQSPELGRNCDQEPSSSVGHMPGLPAP
QIGVVSQPGDLKTNNNFWKPFQCPECGKGFSRSSNLVRHQRTHEEEKSYGCVECGKGFTL
REYLMKHQRTHLGKRPYVCSECWKTFSQRHHLEVHQRSHTGEKPYKCTDCWKSFSRRQHL
QVHRRTHTGEKPYTCECGKSFSRNANLAVHRRAHTGEKPYGCQVCGKRFSKGERLVRHQR
IHTGEKPYHCPACGRSFNQRSILNRHQKTQHRQEPQEP
Download sequence
Identical sequences ENSPCAP00000013830 ENSPCAP00000013830

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