SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000014679 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSPCAP00000014679
Domain Number - Region: 252-272
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0795
Family Classic zinc finger, C2H2 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000014679   Gene: ENSPCAG00000015724   Transcript: ENSPCAT00000015693
Sequence length 1160
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_6436:18541:36054:1 gene:ENSPCAG00000015724 transcript:ENSPCAT00000015693 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MESPVSTPAVLPLHLLVPVVSNDISSPCEQIMVRTRSVGVNTCDVALATEPECLGPCEPG
TSVNLEGIVWQETEDGMLVVNVTWRNKTYVGTLLDCTRHDWAPPRFCDSPTSDLEMRNGR
GRGKRMRPNSNTPVNETAAASDSKGTSSSSKTRAGANSKGRRGSQNSSEHRPPASSTSED
VKASPSCTNKRKNKPLSDMELNSSSEDSKGSKRVRTNSMGSATGSLPGTKVEPTVLDRNC
PSPVLIDCPHPNCNKKYKHINGLKYHQAHAHTDDDSKPEADGDSEYGEEPALHAELGSCN
GASVSQKGCLSPARSATPKVRLLEPHSPSPSGKFSTKGLCKKKLSGERDADLGALSNDGS
DDGPSVMDETSNDAFDSLERKCVEKEKCKKPSSLKPEKIPSKSLKSARPIAPALPPQQIY
TFQTATFPAASPGSSSGLTTTVVQAMPSSPQLKPIQPKPTVMGEPFTVNPALTPAKDKKK
KDKKKKDSSKDLESPLTPGKVCRAEEGKSPFRESSGDGVKMEGLLNGSSDPHQSRLASIK
AEADKIYSFTDNAPSPSIGGSSRLDSTTPTQPMTPLHVVTQNGAEASSVKTSSPAYSDIS
DAGEDGEGKVDSVRSKDPEQLVKEGAKKTLFPPQPQSKDSPYYQGFESYYSPSYAQSSPG
ALNPSSQAGVEGQSLKAKKDEEPEGTEGKVKGDLCEEKKPELSASSQQPSVIQQRPNMYM
QSLYYNQYAYVPPYGYSDQSYHSHLLSTSTAYRQQYEEQQKRQSLEQQRGLDKKAEVGLK
EREAALKEEWKQKPAVPPTLTKAPSLTDLVKLGPGKAKEPGTDPAKSVIIPKLDDASKLP
SQAPEGLKVKQSEASHLGKEVSEAKTGAECGRQAEVDPILWYRQEAEPRMWTYVYPAKYS
DIKPEDERWREERDRKLKEERGRSKDSVSKEDGKESTGADCKLPPAEESRLGSKEPRPSV
HVPVSSPLTQHQSYIPYMHGYSYSQSYDPSHPSYRSVPAVMMQNYPGSYLPSSYSFSPYG
SKVSGGEDADKARASPSVSCKASSESKALDILQQHASHYKSKSPTISDKTSQERDRGGCG
VIGGGGSCSSAGGAGGGERGADRPRSSPSQRLLSAHHHHHLGYSLLPAQYNLPYAAGLSS
TAIVASQQGSAPSLYPPPRR
Download sequence
Identical sequences ENSPCAP00000014679 ENSPCAP00000014679

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]