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Domain assignment for ENSPCAP00000015283 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000015283
Domain Number 1 Region: 35-116
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.58e-26
Family SCAN domain 0.00056
Further Details:      
 
Domain Number 2 Region: 380-436
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.89e-20
Family Classic zinc finger, C2H2 0.022
Further Details:      
 
Domain Number 3 Region: 421-473
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.27e-17
Family Classic zinc finger, C2H2 0.0076
Further Details:      
 
Domain Number 4 Region: 344-393
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000126
Family Classic zinc finger, C2H2 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000015283   Gene: ENSPCAG00000016323   Transcript: ENSPCAT00000016328
Sequence length 483
Comment pep:novel scaffold:proCap1:scaffold_37300:10830:16380:1 gene:ENSPCAG00000016323 transcript:ENSPCAT00000016328 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MALDLTTSWCHENRGNSYGSEPPQLVSAQETRLGEQHWHVNFRAFTCSEEDDPVSDLKRL
CELCHLWLRPDLHTKEQILDKLVLEQFMICMPLDLQALVKESGVENCRDLEEMLRNNRRP
KTWSIVCSQGQEFLLRNPDVQMASNMDGVTVWSREPHSCVNETHSGTDKTCQECQNFPGT
GETSRQHQGHKFLSETTSANAELESLRLEQNLGENLMEDSEGSIIHPEPQLLKVPDSVQA
NAEKNPEEGISIKIVDMGTPLTLVLEKEASVPGGSREDSQKILRHSKRRKSDNSSNSQGR
PHEEVTHLNKRESLTQIGINQSYSPSTMEPIDHTVGQKSPPFTVCRFCEKRFQYKSQFDI
HQRTHTGERPFKCSSCGKGFMQPSDVRVHQRIHTGEKPFKCEFCHRKFTHESTLNGHKRT
HTKEKPFRCTECGKSFSHKGNLNVHRRIHSGTKPYTCPDCGHTFRQLGTFKRHEKTHSKI
ASQ
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Identical sequences ENSPCAP00000015283 ENSPCAP00000015283

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