SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000015627 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPCAP00000015627
Domain Number 1 Region: 271-325
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.25e-20
Family Classic zinc finger, C2H2 0.0093
Further Details:      
 
Domain Number 2 Region: 202-260
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.95e-18
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 
Domain Number 3 Region: 8-69
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 5.23e-18
Family KRAB domain (Kruppel-associated box) 0.0022
Further Details:      
 
Domain Number 4 Region: 310-362
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.24e-16
Family Classic zinc finger, C2H2 0.0063
Further Details:      
 
Domain Number 5 Region: 471-523
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.52e-16
Family Classic zinc finger, C2H2 0.0069
Further Details:      
 
Domain Number 6 Region: 382-434
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000014
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number 7 Region: 433-482
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000605
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 8 Region: 540-591
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000396
Family Classic zinc finger, C2H2 0.0087
Further Details:      
 
Weak hits

Sequence:  ENSPCAP00000015627
Domain Number - Region: 519-542
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0143
Family Classic zinc finger, C2H2 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000015627   Gene: ENSPCAG00000016671   Transcript: ENSPCAT00000016694
Sequence length 607
Comment pep:novel scaffold:proCap1:scaffold_5886:36016:55882:1 gene:ENSPCAG00000016671 transcript:ENSPCAT00000016694 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTVELVKAMPQDLVTFRNVAAGFPREEWERLNPTRISLYKSMMLENYQSLVSLGICIYKS
YMISLLEGKESWKMKSEMTGGPFLHWESKYETQELSLSQDMYDEAFMERIANYPECSTFR
ENRKCEDILKKQIVNQETCIRQETNTHKEILTKEIDYKYTKSGKCVYLSNVEEYVHNHKS
DKKSFIKNSRKINQHKGVYTAKKLFKCNKCEKSFTQSSSLAVQRIHTGERPYECKECRKA
FNQSQHLPQHQRVHTGEKLFECKECRKAVSQNVHLIQHQRIHTEVKPYKRKECGKVFSQP
AHFDQHQRIHTGEKLYECKECGKAFTDGSSFTQHQRCYTGQRPYECIECGKVFRQNASLT
CHWRYYHIEEKSFDCIDCGKAYSDHIVLIQYRRIHTGERLYKCNVCKTFLSLTVHQRIHT
GEKPYECGVCWKDFSHYATHQKVHSGEKPYECKTFRQSVHLASHLRIHTSKPYECKECGK
AFGIDSQLATHQRVHTGEKPFECKEYGKAFNQKAHFAQQHKIHTGEKPCDCECGKIFSKA
TTIQYQRLHSVEKPYKCTECGKVFGDSSSRAQHWGLHTQRPYECVQCKKAFRKSSCYPRC
HTGEKPY
Download sequence
Identical sequences ENSPCAP00000015627 ENSPCAP00000015627

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]