SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000005693 from Procavia capensis 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPCAP00000005693
Domain Number 1 Region: 108-307
Classification Level Classification E-value
Superfamily Sema domain 1.57e-74
Family Sema domain 0.0000002
Further Details:      
 
Domain Number 2 Region: 370-517
Classification Level Classification E-value
Superfamily Sema domain 3.53e-48
Family Sema domain 0.00000391
Further Details:      
 
Domain Number 3 Region: 576-661
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000116
Family I set domains 0.05
Further Details:      
 
Domain Number 4 Region: 514-565
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000244
Family Plexin repeat 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000005693   Gene: ENSPCAG00000006057   Transcript: ENSPCAT00000006097
Sequence length 750
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_23:272600:280072:1 gene:ENSPCAG00000006057 transcript:ENSPCAT00000006097 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGRAAAAAMIPGLALLWASALGGSAPPPRLRLSFQXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTECMNFVKLLH
VYNHTHLLACGTGAFHPTCAFVEVGHRLEEPMLRLDLRSLEDGKGKSPYDPTHQAASVLV
GEELYSGVAADLMGRDFTIFRSLGRQPSLRTEPHDSRWLNEPKFVKVFWIPESENPEDDK
VYFFFRELAVEAAPALGRLWVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPSVEGD
TYFDHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXPYPRPGMCPSKTFGTSSSTKDFPDDVIQFARNHPLMYNSVLPIGGHPLF
LQVGAGYTLTRIVADRVAAADGHYDVLFIGTDIGTVLKVISVPKGNRPSSEGLLLEELHV
FEDSAAVTSMQISSKRHQLYVASRSAVTQIALHRCAAHGRACAECCLARDPYCAWDGAKC
TRFQPSGKRRFRRQDVRNGDPSMLCSGDSLHPTLLERKVFGVEGDSAFLECEPRSLQAHM
NWTFQRTGQQAQTQVPVEGRVQRTAQGLLLRRLQRGDSGVYLCTAVEQGFSQPLRRLVLH
VLNAAQAERLARAEEAAPVAPPSPKLWYRDFLQLVEPGGGGGSSRSSLRMCRPPPAPRPL
PLEPRRKGRNRRTHVLELRAERGPRSAVHG
Download sequence
Identical sequences ENSPCAP00000005693 ENSPCAP00000005693

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]