SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GSVIVT01003212001 from Vitis vinifera

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSVIVT01003212001
Domain Number 1 Region: 327-429
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.66e-19
Family B3 DNA binding domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GSVIVT01003212001
Sequence length 601
Sequence
MSSSTVKICFNSECTDRKSERLKKGWRTRSGDCVELCDRCGSLYDEGRFCETFHSNASGW
RGCKSCAKRVHCGCIASIHSFTLLDTGGIECIPCARKNVVLTPNPAWPPHFFLPLPERLK
DPVKNWSQSQPVWRASNLFNTSIPQSDLRPRMPSEADLSTGVDRLIVSERSSASSMEKKK
IEDSSERSMNGGLKLGALEMLENGNSGTNCEEQPASCVNIPQQSSSLNDDHSAPLLSLAV
PYASSSETNGQTVVSGTLSQPTPSPPLAKKFSGHPHNGVDSSGEAQVRNGRPRGDARGRN
QLLPRYWPRITDQELQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPAIS
QPEGLPLKVQDAKGHEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPE
GKLVMGFRKASTAPSSDQGNETIKTGNGGSTHGDADLADPASAWSKVDKSGYIAKEALGA
KSSIPRKRKNSTLGSKSKRLRIENEDLIELKLTWEEAQGLLRPPLNHVPNVVVIEGYEFE
EYEQMPILCSICISEKIQWAQCEDCFKWRKLPADVCLSSRWTCSENSWDPERYNHQISTI
P
Download sequence
Identical sequences GSVIVT01003212001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]