SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GSVIVT01027166001 from Vitis vinifera

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSVIVT01027166001
Domain Number 1 Region: 116-254
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.75e-41
Family B3 DNA binding domain 0.0034
Further Details:      
 
Domain Number 2 Region: 490-568
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000000000005
Family PB1 domain 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GSVIVT01027166001
Sequence length 607
Sequence
MAHGNNIRGGLEPGLESDHLFTELWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQG
VDQRIPLFNLPSKILCRVVHTRLLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAPKQ
TVHSFCKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHI
FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISS
QSMHLGVLATASHAVTTQTLFVVYYKPRTSQFIISLNKYLEAVNYGFAVGMRFKMRFEGE
DSPERRFTGTIVGIGDISPQWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLN
LTQPPVKIKRPRPLDLPVAENTSSSVPSPFWYAGSSPSHELTQLGGVTEVQSSESQVHWP
PKPKEINGNQNSSIGCRLFGIDLTNNSKATALLEMIQNLDVSKSSNEQKQVVPEASQKET
QGRQSCTPSSRTRTKKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIKGELCPRNKWE
VVFTDDEGDMMLVGDDPWQEFCKMVRKIFIYSSEEVKKMSPRCKLSTSSLDGEGTVISLD
SELRTEP
Download sequence
Identical sequences GSVIVT01027166001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]