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  Home > Genomes > Vicugna pacos 76_1 > ENSVPAP00000000172

Domain assignment for ENSVPAP00000000172 from Vicugna pacos 76_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSVPAP00000000172
Domain Number 1 Region: 1451-1622
Classification Level Classification E-value
Superfamily Fibronectin type III 2.83e-27
Family Fibronectin type III 0.00000881
Further Details:      
 
Domain Number 2 Region: 1893-2060
Classification Level Classification E-value
Superfamily Fibronectin type III 6.39e-27
Family Fibronectin type III 0.00000981
Further Details:      
 
Domain Number 3 Region: 909-1079
Classification Level Classification E-value
Superfamily Fibronectin type III 1.24e-23
Family Fibronectin type III 0.00065
Further Details:      
 
Domain Number 4 Region: 1634-1786
Classification Level Classification E-value
Superfamily Fibronectin type III 1.79e-22
Family Fibronectin type III 0.0000121
Further Details:      
 
Domain Number 5 Region: 1265-1439
Classification Level Classification E-value
Superfamily Fibronectin type III 9.74e-22
Family Fibronectin type III 0.00000938
Further Details:      
 
Domain Number 6 Region: 408-463
Classification Level Classification E-value
Superfamily Kringle-like 9.42e-21
Family Fibronectin type II module 0.0000458
Further Details:      
 
Domain Number 7 Region: 348-403
Classification Level Classification E-value
Superfamily Kringle-like 1.46e-20
Family Fibronectin type II module 0.0000586
Further Details:      
 
Domain Number 8 Region: 1798-1888
Classification Level Classification E-value
Superfamily Fibronectin type III 2.2e-19
Family Fibronectin type III 0.00000432
Further Details:      
 
Domain Number 9 Region: 1173-1261
Classification Level Classification E-value
Superfamily Fibronectin type III 4.41e-17
Family Fibronectin type III 0.0000028
Further Details:      
 
Domain Number 10 Region: 557-603
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000000236
Family Fibronectin type I module 0.0021
Further Details:      
 
Domain Number 11 Region: 515-559
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000000314
Family Fibronectin type I module 0.0044
Further Details:      
 
Domain Number 12 Region: 618-700
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000834
Family Fibronectin type III 0.00000474
Further Details:      
 
Domain Number 13 Region: 230-274
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000157
Family Fibronectin type I module 0.00011
Further Details:      
 
Domain Number 14 Region: 467-508
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000157
Family Fibronectin type I module 0.002
Further Details:      
 
Domain Number 15 Region: 735-824
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000202
Family Fibronectin type III 0.0021
Further Details:      
 
Domain Number 16 Region: 93-138
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000288
Family Fibronectin type I module 0.00012
Further Details:      
 
Domain Number 17 Region: 184-227
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000628
Family Fibronectin type I module 0.00012
Further Details:      
 
Domain Number 18 Region: 2327-2370
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000916
Family Fibronectin type I module 0.002
Further Details:      
 
Domain Number 19 Region: 49-90
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000017
Family Fibronectin type I module 0.0002
Further Details:      
 
Domain Number 20 Region: 141-181
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000353
Family Fibronectin type I module 0.00018
Further Details:      
 
Domain Number 21 Region: 306-344
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000196
Family Fibronectin type I module 0.00032
Further Details:      
 
Domain Number 22 Region: 1094-1180
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000322
Family Fibronectin type III 0.0018
Further Details:      
 
Domain Number 23 Region: 2196-2258
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000117
Family Fibronectin type III 0.0034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSVPAP00000000172   Gene: ENSVPAG00000000185   Transcript: ENSVPAT00000000186
Sequence length 2444
Comment pep:known_by_projection genescaffold:vicPac1:GeneScaffold_1625:133254:200421:-1 gene:ENSVPAG00000000185 transcript:ENSVPAT00000000186 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MLGGPGPGLLLLTILSLGNTVPSAGASKSRRQAQQIIQPQSPLTVGQSKPGCYDNGKHYQ
INQQWERTYLGSALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSMI
WDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCK
PIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRASY
RIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLQTTSAGSGSFTDVRTAIYQPQPHP
QPAPYGHCVTDSGVVYLVGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPC
VLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGALC
HFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYRI
GDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDDITYNVNDTFHKRHEEGHM
LNCTCFGQGRGRWKCDPVDQCQDSESHTFYQIGDSWEKYVHGVRYQCYCYGRGIGEWHCQ
PLQTYPGTTGPVQVIITETPSHPNSHPIQWNAPEPSHISKYILRWKPKNSPGRWKEATIP
GHLNSYTIKGLRPGVIYEGQLISVQHYGHRELTRFDFTTTSTSSAVTSNTVTGETTPLSP
VVATSESVTEITASSFVVSWVSASDTVSGFLVEYELSEEGDEPQYLDLPSTATSVNIPDL
LPGRKYIVNVYQISEEGEQSLILSTSQTTAPDAPPDPTVDQVNDTSIVISWRRPQAPITX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXKVPPPRDLQFVEVTDVKITIMWTPPESPVTGYRVDVIPVNLPGEHGQRLPISRNT
FVEVTGLSPGVTYLFKVFALHHGRESKPLTAQQTTKLDAPTNLRFVNETDSTVIVTWTPP
HARIAGYRLTVGLTRGGQPKQYNVGPSASQYPLRNLQPGSEYAATLVAVKGNQQSPRATG
VFTTLQPLGSIPPYNTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVV
SGLTPGVEYVYTISVLRDGQERDTPIVKKVVTPLSPPTNLHLEANPDTGVLTVSWERSTT
PDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPIS
DTIIPEVPQLTDLSLVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSV
GYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNVGPDTMRVTWAP
PPSIELTNLLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYLVSVSSVYEQHESIP
LRGRQKTGLDSPTGMDFSDITANSFTVHWMIPRAPITGFKIRHHPEHMAGRPREDRVPPS
RNSITLTNLNPGTEYVVSIIAVNGREESPPLVGQQSTVSDVPRDLEVIAATPTSLLISWD
APAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPA
SSKPVSIDYRTEIDKPSQMQVTDVQDNSISVRWLPSSSPVTGYRVTTTPKNQTEMTIEGL
QPTVEYVVSVYAQNRNGESQPLVQTAVTNIDRPKGLAFTDVDVDSIKIAWESPQGQVSRY
RVTYSSPEDGIHELFPAPDGEEETAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTAI
PAPTNLKFTQVTPTSLTAQWTAPNVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGL
MVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITISWRTKTETIT
GFQVDAIPANGQTPVQRTIKPDVRSYTITGLQPGTDYKIHLYTLNDNARSSPVVIDASTA
IDAPSNLRFLATTPNSLLVSWQPPRARITGYIIKFEKPGSPPREVVPRPRPGVTEATITG
LEPGTEYTIQVIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGPEILDVPSTVQKTPF
ITNPGYDTGNGIQLPGTSGQQPSLGQQMIFEEHGFRRTTPPTTXXXXXXXXXXXPPNVNE
EIQIGHVPRGDVDHHLYPHVLGLNPNASTGQEALSQTTISWTPFQESSEYIISCHPIGVD
EEPLQFRVPGTSASATLTGLTRGATYNIIVEALKDQKRHKIREEVVTVGNSXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWCHDNGVNYKIGE
KWDRQGENGQMMSCTCLENGKGEFKCDPHEATCYDDGKTYHVGGGWRCDNCRRPGAEPGH
EGSTGHSYNQYSQRYHQRTNTNVNCPIECFMPLDVQADREDSRE
Download sequence
Identical sequences ENSVPAP00000000172 ENSVPAP00000000172

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.