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Domain assignment for CJA08269 from Caenorhabditis japonica

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CJA08269
Domain Number 1 Region: 385-538
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.64e-34
Family Retroviral integrase, catalytic domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CJA08269   Protein: JA39208   Gene: WBGene00127474
Sequence length 654
Comment JA39208 WBGene00127474 status:Predicted
Sequence
MYKKPNIFLALVLRLPGAYITFYYVFTNDWCWRRSNVPVFNCGLAANTAEHMTKAHNQEA
LTEALAALMTQLASSHELHRQLMEENRALRDAASAAEPPRATAGGTRASNHVRLMADLSR
RIQKYSYTIGEPDSFMRWLTRHEPIFEEDGSELSEREKTRLLLGSLEENTFHRFVDSQRD
VEDIYDVTFKETVVALTKIFGAQRSLMVQRQACFHISRSSGNWEDPLEYTNHIGQVVAGA
KLATMTADEWSVFLFFRGLDAPGDAAAKIYLMQFTEMAERKGETITLSQIHDEWMRFVQI
KQQTKIVATSKQNPQTPVEVWKLEARKTKRRENPRFTPKWGSKDRRQPFCEYCKRDNPTV
RSGNSQQNTKRTRITPSKPCPDTKKPWAHIYVDFAGPIDGFWFLVVEDSKTKYAEVKLTR
KASAAATVDLIEEIFATHGYPDWIVTDNGTQLSSHLFKKMCESHGITHKTTATYCPRSNG
AAERFADILKRVIATIKGSASINQRVLNNFLINYRNTRHAALNGATPAECHFSRKIRTTK
SSPMLAERASENTEWTHYQNMMKGAYDKRNGARANTFKVDQKVYARVQHGNNRPWGYGKS
HSEDRAPKRGSAPYSDRAAARSRGLHIASNCRGKVLGRHVAALVGINVVTYTWK
Download sequence
Identical sequences 281687.CJA08269 CJA08269

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