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Domain assignment for CJA08346 from Caenorhabditis japonica

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CJA08346
Domain Number 1 Region: 24-271
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.53e-87
Family Calponin-homology domain, CH-domain 0.0000169
Further Details:      
 
Domain Number 2 Region: 316-439
Classification Level Classification E-value
Superfamily Spectrin repeat 2.75e-32
Family Spectrin repeat 0.00000563
Further Details:      
 
Domain Number 3 Region: 554-675
Classification Level Classification E-value
Superfamily Spectrin repeat 2.36e-23
Family Spectrin repeat 0.000026
Further Details:      
 
Domain Number 4 Region: 440-549
Classification Level Classification E-value
Superfamily Spectrin repeat 3.66e-23
Family Spectrin repeat 0.0000108
Further Details:      
 
Domain Number 5 Region: 710-821
Classification Level Classification E-value
Superfamily Spectrin repeat 3.45e-17
Family Spectrin repeat 0.0000343
Further Details:      
 
Domain Number 6 Region: 813-934
Classification Level Classification E-value
Superfamily EF-hand 0.0000000000000165
Family Calmodulin-like 0.0038
Further Details:      
 
Weak hits

Sequence:  CJA08346
Domain Number - Region: 276-402
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.0157
Family Formin homology 2 domain (FH2 domain) 0.13
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CJA08346   Protein: JA29255   Gene: WBGene00127550
Sequence length 971
Comment JA29255 WBGene00127550 locus:Cjp-atn-1 status:Partially_confirmed
Sequence
MVDYYQQPPSYHQPGYDYTQQEEEWDREGLLDPAWEKQQKKTFTAWCNSHLRKAGTSIDA
IEEDFRNGLKLMLLLEVISGEPLPKPDRGKMRFHKIANVNKALEYIESKGVKLVSIGAEE
IVDGNVKMTLGLIWTIILRFAIQDINVEGIIRAKLFCPICSFFSELSARDGLLLWCQRKT
APYNNVNVQNFHNSWKDGLAFCALIHRHRPDLLDYSQLHKGDPIHNLNLAFDIAEKHLDI
PKMLDAEDVARHPDEKSTMTYVSCFYHAFRNMREPPPPVIRQPPPQRVVVAPPPPPPERD
WRKDAETAANRICRVLKVNQENEKMMEDYENLASDLLAWINRWMPWLANRSTDDTLPQAQ
QKLEDYRNYRRHEKPPRIEDKGRLETLFNTLQTRLRLSNRPAFLPRDGHLIKDINAAWAG
LEDSEKGFEEWLLSEIMRLERLEHLAEKFRRKCALHEEWAHGKEDALRSNDWRSCGLYKI
KALRKRHEAFESDLGAHQDRVEQIAAIARELNNLRYPDIGPINARCQAICNQWDRLGQLS
SKRRETLEDAERIAERLDSLYLDFAKRAAPFNNWLDGAREDLADLVIVHEMREIEELVSS
HDQFKSTLGDADREFSSINQIEQEVEHLVTSHGLDRELLRNPYTDLSASDIRRKWGEVQS
SVPRRDSQLQAELKRQQSEFKKKFLHEVGFEPTHPYEYQNTQKTSNFTDNERLRTIFAEK
ANQVGPWLERELEQVLAIGLGGRGRLEDAIQQLRAIQRNVLGYKSNLDELERIHQEMQEN
FVFENRKSRYSMESLRVGWETLLTSINKTINEFENQVLLRDSKGISEDQISEFRASFSHF
DKDRAGLDPEQLRACLISVGYTIRPGREGDAELHRVLAHVDPNRMGRVPFEAFLDFMTKE
NSDQDTVEQMIDSFRILASGKVPFITADELERELPRDQAAYCMARMAPSREPGAPPRSFD
YVTFSRTLYSQ
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Identical sequences CJA08346 281687.CJA08346

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