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Domain assignment for CJA09855 from Caenorhabditis japonica

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CJA09855
Domain Number 1 Region: 248-353
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.000000531
Family Single strand DNA-binding domain, SSB 0.027
Further Details:      
 
Weak hits

Sequence:  CJA09855
Domain Number - Region: 86-158
Classification Level Classification E-value
Superfamily OmpH-like 0.0641
Family OmpH-like 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CJA09855   Protein: JA38485   Gene: WBGene00129059
Sequence length 433
Comment JA38485 WBGene00129059 locus:Cjp-brc-2 status:Partially_confirmed
Sequence
MSDAAEEINLQKQTSFQSTDSFDEPKGVPISMEPVFSTAAGVRIDVKQESIDRSAKLLND
QKDLKSSVSFSLKNKPNSTAFVSPFRRDGGPSTSSATKRSASEEADAKNEEPAKKLRRSE
EKEKEEKRRERKEIHADVLRVSRVHEKDQFRLILQDDKTAPLILATISYRRGSDIKFGDR
LIAEVEVLRKDEADHPTEVYVEKVVKNRKNGASSEIRRHSIAKMPFCLEPRFLYELQNES
IKKAVLQIHILDLKMEIYDGCTQCLHKWEKDSSSTRKSCPSCKSSRASVKKMVFCRMRVS
DFSGQHFINISTKTMEKFLGLLGYKGVEEWHHFIEPNERNERIMDSLVFIVLFIFFTLNF
SVNFKKLSEFTGKIFILGRILSIVRTRQRKKALKFRKVPEPFANVSICTSSPKLRVPTDD
DRNREDASRMGVH
Download sequence
Identical sequences CJA09855 281687.CJA09855

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