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Domain assignment for CJA15255 from Caenorhabditis japonica

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CJA15255
Domain Number 1 Region: 1197-1548
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.33e-93
Family Reverse transcriptase 0.00013
Further Details:      
 
Domain Number 2 Region: 114-143
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000942
Family Retrovirus zinc finger-like domains 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CJA15255   Protein: JA27094   Gene: WBGene00134459
Sequence length 1752
Comment JA27094 WBGene00134459 status:Predicted
Sequence
MQAVGGQDEEDVRGPKQSRNGKATTSPMPPARRRISGRLQHPRSDFVQEKAKESFIDGLL
FNLKFHVKGESPSSFQEAQNSAMKFEMLLAEAARANTILPQGLAVMPAPAPTHQPKKAKG
ECFYCGIPGHFANECRRRVKDRANGIFRRENKTGFNPRSQTGFNPRSQTRSFPQNNPITN
HQIFANQPTVQTIQSAVPALHAQMDALKAELEVRQNQINALIRRNDELAGSAPVTQSSNA
RVSCFRWSQTCLLTFLTLGSLLTPAFAVDPLVCMPHSPQNYIRLPAPLDCSKASSPEPHP
VVYKELTIYRPNTIAYESNGTLCKIVKRVTKYSVNMFGVRSEESTVKQLTVSSEECQNMK
KFLHCNHGDLVPVNGIYKTLNDHVINWPSAPFSVFLGTQVTESTNCFLLNTRVTTRFGKE
TPESPAGSMAGCRFTSGFCNTREGAAFQWTPNPRQECKYLELKTMKGYMTNNIWLSKEKE
FAISFDRNSTKLIDCGRKLTISDQGYGVSMATRNKRASTVDELTNFVPSNQLAAQLLAVE
EAVLETTAAWFANNFMSWCSSFNAITAATHAATASNPTLAARQLLKKETSLPGTSVATFS
HSRYVHRFPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLGK
PADQSIFPSRIAVHVLKDTIIPPLSESFVDCVLPVHNAPQDLVLISQSNTLTGQDLIIAP
AVFTSKNAKILVTNPTNEAKILTPDAAQQPEEQDPEFKVDLAQAVVSDEERKQLESLLEE
YHDVFSKNAYDLGRSKTDPVHIYTNTEIPVRARPYRVPVKYQAELEKHINSLIRSARITE
SNTPWTSPIVLVKKKNGSLRRALKTVLCGLEDEALVYIDDILVYSRTFENHLSSIRKVLD
RFRNFNLKASPMKCEFAKSSITFLGHEISKDSYSPNKANVAVIAAFPIPTNVSEVKRFVG
MAGFFRRFIQNFSEIAEPLTRLTRKDKKFSWNKDQQEAFEKLRKLLILEPILGFPDYDKP
FHIFCDASAVAQGAALMQTRPDNEKEYYSVAYASRTLSDTETRWPAIQVEMGAIIFALRQ
FKPYICMPKIILHSDHKPLTFLLQKSKTHDNIARWLVELQSYDINIIHIDGKKNTVADCL
SRARDEENPGDQAELRDIVDFPICMNFSPALLSLARRNVPTTTLDIASEQEKDVQIRAIK
KVLMNIAEVSSLSEEQKDRYALSSITPNGTVMTRTTPESGHFNWKKTKAKIERKYFWPNM
NKEILDRCKSCEKCQAKNSPVPAYRERLLTVVTSRVFQKVGLDLTGPLRTTEGGNKYIVC
ISSTSYVGFPSS
Download sequence
Identical sequences CJA15255 281687.CJA15255

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