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Domain assignment for CJA18092 from Caenorhabditis japonica

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CJA18092
Domain Number 1 Region: 515-623
Classification Level Classification E-value
Superfamily Acid proteases 0.00000158
Family Retroviral protease (retropepsin) 0.031
Further Details:      
 
Weak hits

Sequence:  CJA18092
Domain Number - Region: 479-503
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00012
Family Retrovirus zinc finger-like domains 0.0048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CJA18092   Protein: JA35807   Gene: WBGene00137297
Sequence length 868
Comment JA35807 WBGene00137297 status:Predicted
Sequence
MEDNESGVTKVEMPLDVMDGTRTSVTKGSELSIEERHMSVKQRRKLWKNFARFVDTAEKV
EKLVMEKLLSVQRCTERQREMIVGPIEEFRKELWERFEEIGRDKWSRAVLRLMREQDLET
VEELRELCEQAGPGDRSSRRGSCENHQNELIRLKAENERLEARIRECEAEKLRAEKLLRR
AQRAVEKERKTAEELSESLQQATRELGWFRKNGKVSHWKQEQESSETTGNGRRRKEISVA
GSARSEMTGMVECMSRMMKSSALPEPKVFDGTGEFGEFKRAFLLKYGQVTNRDDELVAIL
EDKFLEGAAKSLFKSLPERYGRSITSLFEEFQGKLRKRQGDSKAEALNEFDGLRKEKSEE
MWEYLIEVEKWSRLAYPEVGEETLSQMRTTKLMMAARDDDTLHRMLIMKRLEIPLRYQYE
QLKDIVLQQENEKRRATRRNYENQMPRAEWWKGKVDDRRKSAREEEQKEESEPNRKEISR
DSANTKCFRCGGVGHVVRQCTSMPVQKVGTVEKSKGRTMIEMVEILGQKRRFAIDSGAVV
SVISTGAWRRLKRRCLDWKKDVEVLAKPNFDLCDASKTVMPVREQIKVKIAIRGRKAVVV
FQLVENELDIFLLGTNSFEVIGVDLKWKAERAVPRTAQNIGERPQSCAQIRAKAKAGLGQ
LIRMEAEKEGVPTSLCLNNEERKRIGVVSNPLVIKRIQVIGVESRKWAKCTLKAAQATMD
RMGQDEERLVSREQTRLMSDGYMVAKKGRREARKRVVNCARRSVKSKFHVENTDLSLRRT
LENRHGGVYTVKLDRERLSSISLSASEPVDSMECLVDCRDMAVPEHESVTNRRLGRSRSG
KESWRDVDAWLRTRARRLERRRHVSADK
Download sequence
Identical sequences 281687.CJA18092 CJA18092

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