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Domain assignment for CJA18132 from Caenorhabditis japonica

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CJA18132
Domain Number 1 Region: 341-564
Classification Level Classification E-value
Superfamily Tropomyosin 0.0000209
Family Tropomyosin 0.0019
Further Details:      
 
Weak hits

Sequence:  CJA18132
Domain Number - Region: 646-716
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0921
Family Spectrin repeat 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CJA18132   Protein: JA33524   Gene: WBGene00137336
Sequence length 720
Comment JA33524 WBGene00137336 locus:Cjp-elks-1 status:Predicted
Sequence
MPRPAPYSARQSMMNSMNASSRNAMGYPSVPANVSISAASRRAPSLQRQHRSMDGLGVLE
AYKDSFDYDLMQPLGPSGKTFHQPSYLPLEISTSQHQHPHQPPYNTSLSALSNPIPTQNA
FWQHNNSMATTSDGIGGGQNFEMMQSSRMGGASLAREYEQLKVEYDAMMEKLNQTMNSIK
TFWSPELKRERQLRRDEATRISHLERMMHSGGAINDYGLGSNEALQLRMELRERDERIRQ
LTTALESGGGGGAMDSRVHELEDTIMRLQDLLTTKETQSMMASQDSSGRQAIENALRRID
EKQARIVELEEELMRQRMGRSNQPRDFTDKNLSGHEMATMRMKMERSEVELAERKQELMT
CQTRMQTAEETSNEMRGHLQLLKDQLTNREQHNTLLQGDVDALRQKLDSKNKQLEQKDER
VTALERDLSSAKADVSDKGELIRQTEMKTSQLVGRIDGLENTVREKEQELDRAKIRLLSH
PDVVREKEMTEKIEQGERERQRLQEHIDQVRRNSEKEQLEQQKTYQKEMIQLKATVENLQ
KELSDRDILLESQNEKIGDMSRDLGGAKKRLEDAMVDKGTDELRRDVESARNEVEKLLKI
VHSLEKENLSLTAQCKQLNCEKKDFDKADNRSTASGSVGGMGTLTKSSSGQSNLHKRIEE
LEEALRESVSITAEREVHLSQQKHHLQQVSSQLNEARKEISDLRRTKQNLSETGGDRHKY
Download sequence
Identical sequences CJA18132 281687.CJA18132

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