SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for CJA24184 from Caenorhabditis japonica

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  CJA24184
Domain Number 1 Region: 7-281
Classification Level Classification E-value
Superfamily Phase 1 flagellin 1.7e-20
Family Phase 1 flagellin 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CJA24184   Protein: JA25287   Gene: WBGene00179756
Sequence length 281
Comment JA25287 WBGene00179756 status:Predicted
Sequence
MNKLLQQRMTTTQSATTTIIENTQDFLGDLTGANSTVEAAETAAKSAQSLLDSVTGLLNT
SYNGEYIFSGVNTDVKPIADYTEGSAAQTAVRQAFEDHFGFGMNDPRVANITGDEMKSFL
EGDFAEQFNDANWDANWSNASDTVIKSRISPSETAATSISANADGFRKTIMSAVMVSEFA
TIGLNNSAFQALTTQAMQTTTQGVTGMTSEQTTLGLAQQRTNAATTRIAAQQKILNESVL
NLEEVDPYEAATRVNALMTQIETSYALTVQLQNMSLLNYLK
Download sequence
Identical sequences 281687.CJA24184 CJA24184

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]