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Domain assignment for CBN20397 from Caenorhabditis brenneri

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CBN20397
Domain Number 1 Region: 151-224
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 3.94e-16
Family Eukaryotic type KH-domain (KH-domain type I) 0.0029
Further Details:      
 
Domain Number 2 Region: 48-119
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0000000000438
Family Eukaryotic type KH-domain (KH-domain type I) 0.0035
Further Details:      
 
Weak hits

Sequence:  CBN20397
Domain Number - Region: 249-288
Classification Level Classification E-value
Superfamily beta-sandwich domain of Sec23/24 0.00154
Family beta-sandwich domain of Sec23/24 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CBN20397   Protein: CN07427   Gene: WBGene00159122
Sequence length 518
Comment CN07427 WBGene00159122 locus:Cbn-mex-3 status:Partially_confirmed
Sequence
MREETAHKQQQMPGAWYYEEDNNASCSPVSDIDDIAQFLNYRTSIGVQNVTESVEVPTSE
HVAEIVGRQGCKIKALRAKTNTYIKTPIRGEDPIFVVTGRPEDVAEAKREIECAADHFTQ
IRASRRHSQGLLSWTSGGFSAFLVVPGAHAPGQVTVYVRVPLRVVGLVVGPKGATIKRIQ
QDTHTYIITPSREREPVFEVTGLPHNVDAARKEIETHIFQRTGNLPETEKDFSNVIGAGA
GGLGAVGSAHQHHQMLMQQKQQQHVVQQQQQLQAQQQAQQMMYQRKVAAAAALAGFGANN
NLFNQMGGAAATNGHHDLPFGMESSLGLDALLRSFPSMRNSLTPDHLQGFGRSCAAAAAA
AAAASSTGRLPGLTKMPSSSSTISSSRPSLGGQASLKHELPTYDYWGNNNSIHDIMENEI
LSASRKYDGNMMSSGWSTGAATAIGYEKEQMQLQQKMREESPTNGLMSLKGSSNSGFGFL
NTIWSDHNLSPGSLPSASASPASSNCDHNDHTLVPING
Download sequence
Identical sequences G0PCP0
135651.CBN20397 CBN20397

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