SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PPA18829 from Pristionchus pacificus

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PPA18829
Domain Number 1 Region: 19-299
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 3.3e-41
Family FCH domain 0.0021
Further Details:      
 
Domain Number 2 Region: 418-477
Classification Level Classification E-value
Superfamily SH3-domain 5.12e-17
Family SH3-domain 0.00088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GBrowse: PPA18829   Protein: PP14379   Gene: WBGene00108383
Sequence length 478
Comment PP14379 WBGene00108383 locus:Ppa-sdpn-1 status:Predicted
Sequence
MAETAMGGFWEIGAYRTNVKRIRDGMEQIEELSRMAKERAEIEKQYVRSLQTFSDKWRGQ
VDRTVPEGALKRGWLTLVEESEALSMQHGRARDRLLDEIVKTLALFRKENHHPSAFRSPK
EIREIEEAFEKAQKHWKKLFERVESAKKAYHGACRAEKSAGILVQNAQADTAVTPDQVNK
MKERLMKAKDDVVKTRKHYELQLQEIAQYRGPYIENMSFVFEKCQLGEMKRAKFLIEMMA
GHESVMADLVRNRTFINLHIDMEQKFKETNESVLQADLKQWSTQFGVDAATLWPTYEEYS
PEMRQISNSKTMSKDNGGVVLTRQIIKNEEVPAAVSTRTSTIASSKRNSVIPEPPKPSNY
SDSDTGTYDSRKSAEKPPKIEDAKGSQEKWADSQTDSQPATTPDSAKFADFDDDTPVAPV
RGRDARVLYDYNPMEDDEIALKKGEIIELLSEPDSLGWCQGRVGTACGLFPASYVQTV
Download sequence
Identical sequences A0A2A6D108 H3F9H1
PPA18829

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]