SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|374296004|ref|YP_005046195.1| from Clostridium clariflavum DSM 19732

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|374296004|ref|YP_005046195.1|
Domain Number 1 Region: 231-366
Classification Level Classification E-value
Superfamily Hedgehog/intein (Hint) domain 1.28e-26
Family Intein (protein splicing domain) 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|374296004|ref|YP_005046195.1|
Sequence length 580
Comment hypothetical protein [Clostridium clariflavum DSM 19732]
Sequence
MFFDFGDIISKEDFINMMGPQWEFQYANTTVNLEVIDVVHRFLDLGGMIPVFGTLFDGTN
AILYFVEGDMVNWCLSMLGTIELIQYGCAGLKIAAKALKATDKMMLGKNSLKVATDSIGL
IKAGKANMLDDIASITRTQKGYEFVTESGIIFKMLDDDIPAAAKSVVKSMSDSTDELMTC
LKREPEALFELVEETKELDNTILYRLRDDTEIQLFKSDLTPEQIICSTIGCFTGDTLVTT
KEGLKRIDEVKTGDYVLSKDVKSGEIGYKKVNYVYIKNTSKLVKLFVGNEEINTTSSHLF
FTDSGWWKSAKNIKVGDRILTDDGELKEVTGTKVVELEEPVRIYNLNVDEFHTYFVGSQG
LLVHNNCLEEMMAAGREAIAEARACGVTDPKLLSEIGQFAADGARSKYIKPTGEFVDDIL
EADYQKYVARKNAQGKTPRERTDWKDARDYWINDSPLARGNAFNDKAIKEGWYPFNEVHL
ENGKRLDSYDPYKGEIVSRKATDLEEIQLSTFEGYLREMQYKYKPGTKIRSNKYPEIDGQ
LLSGKQILEIPDSNLNFSEIQEYIDLAKNKYGIEIRFRSE
Download sequence
Identical sequences G8LSG7
gi|374296004|ref|YP_005046195.1| WP_014254864.1.34793

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]