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Domain assignment for gi|374298047|ref|YP_005048238.1| from Clostridium clariflavum DSM 19732

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374298047|ref|YP_005048238.1|
Domain Number 1 Region: 50-171
Classification Level Classification E-value
Superfamily Insert subdomain of RNA polymerase alpha subunit 1.83e-44
Family Insert subdomain of RNA polymerase alpha subunit 0.0000525
Further Details:      
 
Domain Number 2 Region: 3-50,172-226
Classification Level Classification E-value
Superfamily RBP11-like subunits of RNA polymerase 9.94e-35
Family RNA polymerase alpha subunit dimerisation domain 0.00055
Further Details:      
 
Domain Number 3 Region: 247-311
Classification Level Classification E-value
Superfamily C-terminal domain of RNA polymerase alpha subunit 1.44e-24
Family C-terminal domain of RNA polymerase alpha subunit 0.0000575
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|374298047|ref|YP_005048238.1|
Sequence length 315
Comment DNA-directed RNA polymerase subunit alpha [Clostridium clariflavum DSM 19732]
Sequence
MIEIEKPKIECVISSEDNTYGKFVVEPLERGYGITLGNALRRILLSSLPGAAVTSIKIDG
VLHEFSTIPGVVEDVTEIILNIKGLSLKLHGDGPKVMYIDADGEGEVTAGDIKTDADVEI
LNPEHKIATLSGDHRLYMELTVNRGRGYVSAEKNKHPGQPIGIIPVDSIYTPVTKVNYTV
ENTRVGQVTDYDKLTLEVWTNGSIKPDEAISLGAKIMSEHLNLFIDLSDNAKNAEIMVEK
EETKKEKVLEMTIEELDLSVRSYNCLKRAGINTVEDLTNRTEEDMMKVRNLGKKSLEEVY
NKLKALGLSLAPSED
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Identical sequences G8M2E4
WP_014256816.1.34793 WP_014256816.1.85326 gi|374298047|ref|YP_005048238.1|

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