SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|374298370|ref|YP_005048561.1| from Clostridium clariflavum DSM 19732

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|374298370|ref|YP_005048561.1|
Domain Number 1 Region: 96-224
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.17e-31
Family Cellulose-binding domain family III 0.00016
Further Details:      
 
Domain Number 2 Region: 250-378
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.17e-31
Family Cellulose-binding domain family III 0.00016
Further Details:      
 
Domain Number 3 Region: 403-531
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.17e-31
Family Cellulose-binding domain family III 0.00016
Further Details:      
 
Domain Number 4 Region: 557-685
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.17e-31
Family Cellulose-binding domain family III 0.00016
Further Details:      
 
Domain Number 5 Region: 710-838
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.17e-31
Family Cellulose-binding domain family III 0.00016
Further Details:      
 
Domain Number 6 Region: 864-992
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.17e-31
Family Cellulose-binding domain family III 0.00016
Further Details:      
 
Domain Number 7 Region: 1017-1145
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.17e-31
Family Cellulose-binding domain family III 0.00016
Further Details:      
 
Domain Number 8 Region: 1168-1266
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.86e-30
Family Cellulose-binding domain family II 0.00014
Further Details:      
 
Domain Number 9 Region: 2-71
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 0.000000000249
Family Cellulose-binding domain family III 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|374298370|ref|YP_005048561.1|
Sequence length 1267
Comment cellobiohydrolase A (1,4-beta-cellobiosidase A) [Clostridium clariflavum DSM 19732]
Sequence
MTINKEKDGIIRILFLDDTLLNEYISKDGVFANITFKVSGTSTVTISKATFGDRSLKPVS
ATLTAGTVTVGGGTTQPTVPPTSQPTTGPIVTGFTAYVESVTASAGEQVVVPIKLANVPS
NGITTADMTITYDASKLEYVKGEAGSIVINPSINFAINKEKDGIIRILFLDDTLLNEYIS
KDGVFANITFKVSGTSTVTISKATFGDRSLKPVSATLTAGTVTVGGGTTQPTVPPTSQPT
TGPIVTGFTAYVESVTASAGEQVVVPIKLANVPSNGITTADMTITYDASKLEYVKGEAGS
IVINPSINFAINKEKDGIIRILFLDDTLLNEYISKDGVFANITFKVSGTSTVTISKATFG
DRSLKPVSATLTAGTVTVGGGTTQPTPTPTQPTTGPIVTGFTAYVESVTASAGEQVVVPI
KLANVPSNGITTADMTITYDASKLEYVKGEAGSIVINPSINFAINKEKDGIIRILFLDDT
LLNEYISKDGVFANITFKVSGTSTVTISKATFGDRSLKPVSATLTAGTVTVGGGTTQPTV
PPTSQPSTGPIVTGFTAYVESVTASAGEQVVVPIKLANVPSNGITTADMTITYDASKLEY
VKGEAGSIVINPSINFAINKEKDGIIRILFLDDTLLNEYISKDGVFANITFKVSGTSTVT
ISKATFGDRSLKPVSATLTAGTVTVGGGTTQPTPTPTQPTTGPIVTGFTAYVESVTASAG
EQVVVPIKLANVPSNGITTADMTITYDASKLEYVKGEAGSIVINPSINFAINKEKDGIIR
ILFLDDTLLNEYISKDGVFANITFKVSGTSTVTISKATFGDRSLKPVSATLTAGTVTVGG
GTTQPTVPPTSQPTTGPIVTGFTAYVESVTASAGEQVVVPIKLANVPSNGITTADMTITY
DASKLEYVKGEAGSIVINPSINFAINKEKDGIIRILFLDDTLLNEYISKDGVFANITFKV
SGTSTVTISKATFGDRSLKPVSATLTAGTVTVGGGTTQPTPTPTQPTTGPIVTGFTAYVE
SVTASAGEQVVVPIKLANVPSNGITTADMTITYDASKLEYVKGEAGSIVINPSINFAINK
EKDGIIRILFLDDTLLNEYISKDGVFANITFKVSGTSTVTISKATFGDRSLKPVSATLTA
GTVTVGGGTTQPTPTPTQPTTQPTTQPQTGNFSVKYSQNSWGTGATVSIEIKNNGSTAVN
GWTLSFDFPGNQKITNAWNCTYTQNGNAVSISNVDYNGTIPPGGSVVIGFNISYSGTNAE
PTNFIVK
Download sequence
Identical sequences G8LUI9
WP_014257132.1.34793 gi|374298370|ref|YP_005048561.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]