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Domain assignment for CRE29450 from Caenorhabditis remanei

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CRE29450
Domain Number 1 Region: 270-536
Classification Level Classification E-value
Superfamily Class II aaRS and biotin synthetases 8.19e-73
Family Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 0.0000185
Further Details:      
 
Weak hits

Sequence:  CRE29450
Domain Number - Region: 72-138
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.00378
Family MarR-like transcriptional regulators 0.077
Further Details:      
 
Domain Number - Region: 6-56
Classification Level Classification E-value
Superfamily GST C-terminal domain-like 0.0068
Family Glutathione S-transferase (GST), C-terminal domain 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CRE29450   Protein: RP13981   Gene: WBGene00064293
Sequence length 551
Comment RP13981 WBGene00064293 locus:Cre-fars-1 status:Partially_confirmed
Sequence
MSDPNRLNQILQDQPYIEGFAQPSSVDFSTRASINPNDLKGREHLERWFHHLSSFEMTAD
TSVRSTENLPQQILDFLGKSNEFNSIQLAQQWDIDHQKLIGAIKSLLANEGVLATKDVTE
KRLELTNEGVQFANEGSPEFLVFEFIGADGAAQADIQKQPFGKIGMAKAMQFKWVSVDKG
RVVRQTSDVADTTRKQLESLRIGGDVDENGKKELKKRKLISEVNIKGLLVSKGDSFTTSL
AKQEADLTPEMIASGSWKDKQFKKYNFESLGVVPSSGHLHPLMKVRSEFRQIFFSMGFSE
MATNRYVESSFWNFDALFQPQQHPARDAHDTFFVSDPAISTTFPQDYLERVKTVHSKGGY
GSAGYNYDWKIEEAQKNVLRTHTTAVSARQLYQLAQEGFRPSKLFSIDRVFRNETLDATH
LAEFHQVEGVIAEKNLSLAHLIGVFTEFFKKLGITNLRFKPTYNPYTEPSMEIFAYHQGL
AKWVEIGNSGMFRPEMLLPMGLPADVNVAGYGLSLERPTMIKYGINNIRDLFGSKIDLEV
VYNTPICRLDK
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Identical sequences E3LV24
CRE29450 XP_003112092.1.11157 31234.CRE29450

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