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Domain assignment for gi|56750075|ref|YP_170776.1| from Synechococcus elongatus PCC 6301

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|56750075|ref|YP_170776.1|
Domain Number 1 Region: 2-358,393-411
Classification Level Classification E-value
Superfamily PFL-like glycyl radical enzymes 9.16e-115
Family B12-dependent (class II) ribonucleotide reductase 0.00018
Further Details:      
 
Domain Number 2 Region: 780-1131
Classification Level Classification E-value
Superfamily PFL-like glycyl radical enzymes 8.85e-110
Family B12-dependent (class II) ribonucleotide reductase 0.00035
Further Details:      
 
Domain Number 3 Region: 409-534,707-779
Classification Level Classification E-value
Superfamily Hedgehog/intein (Hint) domain 3.34e-43
Family Intein (protein splicing domain) 0.0069
Further Details:      
 
Domain Number 4 Region: 609-732
Classification Level Classification E-value
Superfamily Homing endonucleases 1.96e-16
Family Intein endonuclease 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|56750075|ref|YP_170776.1|
Sequence length 1148
Comment ribonucleoside triphosphate reductase B [Synechococcus elongatus PCC 6301]
Sequence
MVQELSRVLKISDFPATAPAANPVFYRTYSRKTATGRESWQEVSDRTIQGLAELGKLTQA
EVELLQRYQEKQQSLPSGRWLWVGGTDWIAKPENYNGGYNCTSTNVIDWRAFGLMMDLAM
MGCGTGAILEPKYINQLPAIRNELQVSIVGALGQTPAEERQEQTRVAIEGNSVTIRVGDS
RAGWVKSYQTLLELSSDDRFTGPVQVAIDLSDVRPAGERLKGFGGVANPVKLPELYDRVA
QILNKAVGRQLDSIECCLLIDQAAVVVVAGNVRRSAGMRQFDSGDLRAAGAKENLWQQDE
AGNWRIDPERDALRMANHTRVYHHKPTREEVLEAVTKQFYSGEGAIQYAPEAIARSNADL
LTTPELRQEFIQIYLELGAEEAKNWLKTNWPNQSDRELNHRLQRYGLNPCVTADTWVHTG
EGPRQVKDLIGQQHSTYINGELFSTTPDGFFCSGIKPVLKIQTQEGYSLRPTANHRVLKV
TAQTQKAQYSEWVEAGDLQAGDRILLHNHRGLQAWEGVGTEAEGWLLGNFIGDGCFSVNE
ANYQRQGLLRFWGETQAEMAEKALALGEVASVTTAAHAAVVHPRNGYSQINSAKLYQLAT
SFGLKQGLKTITPAIEQASYAFYQGFLRGLFDADGSVQGSQEKGVSVRLAQSDLGLLEAV
QRMLLRLGIASTIYQERRPAGERLLPDSQRQPKAYFCKAQHELAIANDNLQIFAELIGFL
DEAKQEKLTELLGAYKRQPNRERFTATVVSLEADGVETVYDCTVPGPARFDANGLVAHNC
GEILGADFHCNLAEVHLNQIDPQDTKTQEDAFRAGAISVAALLNHQFSEERYQFSREVDP
IVGVSFTGLFDFFVHAFGTPWLEWWTEGRPETEQGLEFKRQEAAYLNRWRDVVHAAVWDY
CDRHDLRRPNRCTTVQPTGTKSLLTGASPGWHPPKAQRFLRRITFRKNDPVAMACLDYGY
SIVPSQSDKDENGNLLNDPFDPRCAEWLVEIPTEVSWANLPGADQVDISQFSALAQFDFY
MQVQTHYTTHNTSATIEFREPEIQPLADRIYEAIANNQGYMSAALLARFDANATFPRLPF
EPIDKATYERLEAEVVQRRRTDDFLAALRLYDSGFQVEAGPAGCDSDKCMMPRAKTELEN
SCSGKHFC
Download sequence
Identical sequences A0A0H3JZ52
WP_011242379.1.5740 gi|56750075|ref|YP_170776.1| 269084.syc0066_d

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