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Domain assignment for gi|385780038|ref|YP_005689203.1| from Clostridium thermocellum DSM 1313

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|385780038|ref|YP_005689203.1|
Domain Number 1 Region: 92-174
Classification Level Classification E-value
Superfamily Copper amine oxidase, domain N 2.29e-22
Family Copper amine oxidase, domain N 0.01
Further Details:      
 
Weak hits

Sequence:  gi|385780038|ref|YP_005689203.1|
Domain Number - Region: 463-652
Classification Level Classification E-value
Superfamily YWTD domain 0.0023
Family YWTD domain 0.029
Further Details:      
 
Domain Number - Region: 284-499,538-560
Classification Level Classification E-value
Superfamily DPP6 N-terminal domain-like 0.00549
Family DPP6 N-terminal domain-like 0.04
Further Details:      
 
Domain Number - Region: 41-90
Classification Level Classification E-value
Superfamily Apolipophorin-III 0.0732
Family Apolipophorin-III 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|385780038|ref|YP_005689203.1|
Sequence length 845
Comment beta propeller domain [Clostridium thermocellum DSM 1313]
Sequence
MKKIVKILCIAVVLALAVIPLGMSFAESVKNKKSIEDKSAESNSTEDKSSIDDRLKNAIA
LYIGSSQALVNNVETQVDSTNANVKPYIKDGRTLVPVRFVSESIGAQVDWDRKNSRVTVK
LNNKVVELVIGNKIMKVGDKEEVLDVAPEISEGRTYLPLRSLVEALGKKVFYDRGLIVIS
DREDVFDVSKDKGLIDEVISRVNNLPRVGSVEELKKMLENSGWAYGRSRGIYLADELAVE
ADLAVNSAPVAEKAKMSEAEGSIDYSTTNVQVEGVDEADVVKTDGKYIYQINNNRVVVIK
AYDTVAGNAYSASGMKIESMLNFDDDSFYPQELYVDGDYLVAIGNHYENVQADISVKKRV
SYDIHPFYLQRTTVKAIVFDISDRANIKKLREVEVEGNYVSSRKIDSVLYLVANMYPNIY
YLETEPDKIVPSYRDTAVSDKYIDLKCTDIRYFPNSKESNFMNIAAFDITSNEEVNIQTY
LGAGENIYVSSENLYVSVTNYNYGLIRPLPADVLTVEPDAPVSNKIAAEPIASDLPSNRE
TTTVYKFSLNGTKVTYLNKGDVPGRILNQFSMDEYNGFFRIATTVGDAWGTGDNVSKNNV
YILDDTMNITGKIEDIAPGEMIYSVRFMGKRAYVVTFKTVDPLFVIDLEEPSKPKILGAL
KIPGYSDYLHPYDENHIIGFGKDTVEIKGNAYYKGMKIALFDVSDVTNPIQKFSEIIGDR
GTESDVLNNHKALLFSKNKNLLAFPVTVMEVDDAQKDESLAYGRFTFQGAYVYSIDAENG
FKLRGKITHLSDEDYKKSGYYYNPEKHVERILYIGDTLYTLSKGMVKAHELWSMEESGSI
MIPKN
Download sequence
Identical sequences WP_003516730.1.19387 WP_003516730.1.20586 WP_003516730.1.55520 WP_003516730.1.6636 WP_003516730.1.6965 gi|385780038|ref|YP_005689203.1|

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