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Domain assignment for gi|385780063|ref|YP_005689228.1| from Clostridium thermocellum DSM 1313

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|385780063|ref|YP_005689228.1|
Domain Number 1 Region: 44-382
Classification Level Classification E-value
Superfamily (Trans)glycosidases 2.27e-50
Family beta-glycanases 0.0061
Further Details:      
 
Domain Number 2 Region: 475-614
Classification Level Classification E-value
Superfamily AbfB domain 2.35e-46
Family AbfB domain 0.00016
Further Details:      
 
Domain Number 3 Region: 658-892
Classification Level Classification E-value
Superfamily Arabinanase/levansucrase/invertase 2.41e-21
Family alpha-L-arabinanase-like 0.081
Further Details:      
 
Domain Number 4 Region: 914-982
Classification Level Classification E-value
Superfamily Type I dockerin domain 2.06e-18
Family Type I dockerin domain 0.0004
Further Details:      
 
Domain Number 5 Region: 378-468
Classification Level Classification E-value
Superfamily Glycosyl hydrolase domain 0.000000000101
Family Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|385780063|ref|YP_005689228.1|
Sequence length 982
Comment alpha-L-arabinofuranosidase [Clostridium thermocellum DSM 1313]
Sequence
MNNLKKYTLVAVFVFLTAVCFQHPGITSAVTTITIDPDATYQTIEGWGASICWWGNQIGR
WSPDNRNRLIEKIVSPTDGLGYNIFRYNIGGGDNPGHNHMRDYADIQGYQNADRSWNWNA
DAAQRAVLTRLIERGRYYGSEIILEAFSNSPPYWMTKSGCASGTSDGSNNLRDDCYDDFA
DYLTEVVKHFRDAWGITFRTLEPMNEPNSDWWKAGGRQEGCSFSYANQQRIIKEVGEKLK
AKGLTGTTVSAADEASIDTALEGLQSYDATTLSYMSQLNVHSYFGSKRAQLRDLAKSKGL
RIWQSESGPLSFNGDMADSCIMLSKRIVTDLKELQCVAWLDWQIIDGGNWGSIYVDDASQ
TFTLTEKFYMHANYSRFIRPGYTIIGANNEKTIAAISPDKKKLVIVATNDNKSSSANYTF
NLTRFSGVNSTVEVYRTSPSLSLAKSIITASNKIVSDTLPPYSINTYVITLDGGVESVPA
VGLQSYNYPNRYVRHADFDARIDENVTPLEDSQWRLVPGLANSSEGYVSIQSVNYPGYYL
RHWDYDFRLDKNDGTTIFAEDATFKLVPGLADPSCVSFQSYNYPDRYIRHYGYLLKLERI
STDLDRQDATFLIISDDSPGPITDSGYIMAYFKQAPGEYGLNLCYSTDGLHWRNINDGKP
VLYAQMGTKGIRDPYIFRKQDGKFGIVATDMLGTNWGDTSQYIHYWESEDLINFTERLIK
VHNKSNMHAWAPEVFYDENRKQYGIYWAGNTDYNRIYVNYTTDFDTVSDCQVFFDPGYDV
IDAHIVSDKGMYYLFFKDERASGKAIKVARSSSLTPNSFTVFTPNFITSPNTEGPFVFKD
NNSDSWYMYVDIYSNNGIFECWKTNDLNALSWTKVTGISVPPGVRHGSVVKVNRWELETA
ISRKVVTPPAPTPPPVLKGDVNADGVINSSDIMVLKRYLLRTITLTEEMLLNADTNGDGA
VNSSDFTLLKRYILRSIDSFPV
Download sequence
Identical sequences gi|385780063|ref|YP_005689228.1| WP_003516692.1.19387 WP_003516692.1.20586 WP_003516692.1.55520 WP_003516692.1.6636 WP_003516692.1.6965

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