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Domain assignment for gi|385779304|ref|YP_005688469.1| from Clostridium thermocellum DSM 1313

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|385779304|ref|YP_005688469.1|
Domain Number 1 Region: 199-466
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 1.66e-71
Family Regulator of chromosome condensation RCC1 0.03
Further Details:      
 
Domain Number 2 Region: 109-238
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 6.8e-29
Family Regulator of chromosome condensation RCC1 0.062
Further Details:      
 
Domain Number 3 Region: 35-103
Classification Level Classification E-value
Superfamily Type I dockerin domain 1.37e-18
Family Type I dockerin domain 0.00078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|385779304|ref|YP_005688469.1|
Sequence length 469
Comment Dockerin type 1 [Clostridium thermocellum DSM 1313]
Sequence
MRKYGLKKIVWMLGILCFLVVSLNTSIFAADGKNVVLGDVNGDSKINAIDVLLMKKYILK
VINDLPSDGVKAADVNADGQINSIDFTWLKKYMLKAVEKFPGEASNNPDAVIQFESGFAH
SVLLKKDGTVWVLGNNGKGQLGLPEVSAVNEPVMINGLSGIKSVAAGREHTLALQEDGTL
WAWGNNYSLQLIEYMERDPDTKERFTSIPIKVETHSDIKYVAAKFSRTLIVKNDGTVWLY
SLPPINTSSDAEYMPWEIKGFGDIKMADIGTGHIVALREDGTVWTWGENVWGQLGNGWQQ
HHNIHTYIYFEPNQAKNLSDIVSIAAGDAHSVALKSDGTVWTWGSNFNGELGNGTTTYIL
EPKKVEGLEDIVAIDAGIGHTVALKADGTVWVWGKNSYGQLGNGTTMRSTVPIQVEGLEG
IVAIQAGMECTIAYKNDGTVWAWGKNDFGQLGDGTFENILRPVKVFERK
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Identical sequences A3DC18
gi|125972780|ref|YP_001036690.1| 203119.Cthe_0258 gi|385779304|ref|YP_005688469.1| WP_003512395.1.19387 WP_003512395.1.20586 WP_003512395.1.31213 WP_003512395.1.55520 WP_003512395.1.60145 WP_003512395.1.6636 WP_003512395.1.6965

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