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Domain assignment for gi|385780127|ref|YP_005689292.1| from Clostridium thermocellum DSM 1313

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|385780127|ref|YP_005689292.1|
Domain Number 1 Region: 309-613
Classification Level Classification E-value
Superfamily (Trans)glycosidases 1.74e-81
Family beta-glycanases 0.00072
Further Details:      
 
Domain Number 2 Region: 45-197
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 5.59e-47
Family beta-Galactosidase/glucuronidase, N-terminal domain 0.016
Further Details:      
 
Domain Number 3 Region: 813-943
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 8.67e-39
Family Family 6 carbohydrate binding module, CBM6 0.00011
Further Details:      
 
Domain Number 4 Region: 206-311
Classification Level Classification E-value
Superfamily beta-Galactosidase/glucuronidase domain 1.27e-22
Family beta-Galactosidase/glucuronidase domain 0.0041
Further Details:      
 
Domain Number 5 Region: 951-1013
Classification Level Classification E-value
Superfamily Type I dockerin domain 1.57e-16
Family Type I dockerin domain 0.00045
Further Details:      
 
Domain Number 6 Region: 695-797
Classification Level Classification E-value
Superfamily Invasin/intimin cell-adhesion fragments 0.000012
Family Invasin/intimin cell-adhesion fragments 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|385780127|ref|YP_005689292.1|
Sequence length 1019
Comment glycoside hydrolase [Clostridium thermocellum DSM 1313]
Sequence
MKKRAILSMLLVLSLILVGIPELQYPVMAASIELKGTDIYNGLRGQSFNEGWKFYKGDVN
NGQSINYDDSNWSDVTLPHDWSIFNSFNQRSPAGDGGGYLDGGIGWYRKTFTVPSDYSGK
KVFIQFDGAYMNSQVWINGTYLGIRPYGYSSFEYDLTPYLNIGGKNVIAVKINNNQPNSR
WYSGSGIYRNVWLTVLDPVHVDYCGMFITTPNVSRDSATANVSTKVVNQGNSEKTVSLKT
IIMDANGNQVASDTSSAVNISAGSDYTFNQNLTVSNPNLWSPDSPYLYMVQTQVIVDGKV
ADTYKSTMGFRYLNFSSTTGFSLNGVKTKIKGVCMHHDLGALGAAVNYRAIERQLQIMKE
MGCNAIRTAHNPPDPQVLEICDRLGLMVMDEAFDCWETGKTANDYHLYFKDWAKRDLQDM
VKRDRNHPSVIMWSIGNEIPNATVETATKLKNWVKEIDPTRPVTWGCFAINMSDDTYKRI
ASVLDLVGYNYFPFMYDQGHKEHPEWIMFGSETSSAVRSRGVYKTPTNQNILTGNDNQCS
SYDNSVVAWGNSAESSYYEINRRDYMLGEFVWTGFDYIGEPTPYKWPSKSSYFGIVDTCG
FPKDIYYFYQSKWSDKPMVHILPHWNWSNGTTVEVWAYSNCDTVELFLNGTSLGVKSMGN
NGHVSWNVPWVPGTLRAKAVKGNIVVYDEVTTAGNPAKIQLKPDRTTITADGKDLVFIET
DIVDSNGVLVPTASNTVNFSISGPGVIVGVDNGNAASLEPYKANSRQAFNGKCLVIVQAT
KTNGTIIVTASSNGLESDRVIIKTTGGEPEPTPVPRSAFTRIEAESYDAQSGIQTEDCSE
GGKDVGYIENGDFVVYKAIDFGRGAASFKARVASATSGGNIELRIDSIDGPVVGICPVAG
TGGWQEWADATCEVSDLKGVHDLYLKFTGGSGYLLNVNWFTFVEGNSDEDLGDLNGDGKV
NSTDLQLMKMHVLRQRQLTGTSLLNADVNRDGKVDSTDVALLKRYILRQISSFDDYARS
Download sequence
Identical sequences gi|385780127|ref|YP_005689292.1| WP_003513657.1.16390 WP_003513657.1.19387 WP_003513657.1.20586 WP_003513657.1.55520 WP_003513657.1.60145 WP_003513657.1.6636 WP_003513657.1.6965

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