SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSARP00000002608 from Sorex araneus 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSARP00000002608
Domain Number 1 Region: 364-413
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000631
Family V set domains (antibody variable domain-like) 0.069
Further Details:      
 
Weak hits

Sequence:  ENSSARP00000002608
Domain Number - Region: 567-606
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00461
Family Fibronectin type III 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSARP00000002608   Gene: ENSSARG00000002899   Transcript: ENSSART00000002882
Sequence length 672
Comment pep:novel genescaffold:COMMON_SHREW1:GeneScaffold_5342:3901:7215:1 gene:ENSSARG00000002899 transcript:ENSSART00000002882 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence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Download sequence
Identical sequences ENSSARP00000002608 ENSSARP00000002608

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]