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Domain assignment for ENSSARP00000003531 from Sorex araneus 69_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSARP00000003531
Domain Number 1 Region: 435-474
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000288
Family Canonical RBD 0.00047
Further Details:      
 
Domain Number 2 Region: 481-531
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000271
Family Canonical RBD 0.0001
Further Details:      
 
Weak hits

Sequence:  ENSSARP00000003531
Domain Number - Region: 290-322
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000555
Family Classic zinc finger, C2H2 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSARP00000003531   Gene: ENSSARG00000003890   Transcript: ENSSART00000003896
Sequence length 846
Comment pep:novel genescaffold:COMMON_SHREW1:GeneScaffold_169:56444:73970:1 gene:ENSSARG00000003890 transcript:ENSSART00000003896 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLASLMNLGM
SSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDADQASNILASFGLSAR
DLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSAAREPPYRVPRDDWEE
KRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDSFFGETS
HNYHKFDSEYDRMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCSICDLPV
HSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPGILGPPP
PSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMFQRGKNXXXXXXXXXXX
XXXXXXXXXXXXXXXAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKYKRIKKPE
GKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDKIE
ELDQENEAALENGIKNEENRESGADSAENAADPNKEASENADGQNDENKEDYTIPDEYRI
GPYQPNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFLNKLAEER
RQKKEA
Download sequence
Identical sequences ENSSARP00000003531 ENSSARP00000003531

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