SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSARP00000011537 from Sorex araneus 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSARP00000011537
Domain Number 1 Region: 93-189
Classification Level Classification E-value
Superfamily Fibronectin type III 1.01e-26
Family Fibronectin type III 0.00031
Further Details:      
 
Domain Number 2 Region: 196-300
Classification Level Classification E-value
Superfamily Fibronectin type III 1.56e-17
Family Fibronectin type III 0.00067
Further Details:      
 
Domain Number 3 Region: 2-84
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000334
Family I set domains 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSARP00000011537   Gene: ENSSARG00000012774   Transcript: ENSSART00000012775
Sequence length 382
Comment pep:novel genescaffold:COMMON_SHREW1:GeneScaffold_6692:5662:10932:-1 gene:ENSSARG00000012774 transcript:ENSSART00000012775 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TAGISPQDPTLLIGSSLQATCSVHGDTSGATAESLYWTLNGRRLPPELSRVLNASTLALA
LANLNGSKQQSGDNLVCHARDGSILAGSCLYVGLPPEKPFNISCWSKNMKELTCRWTPGA
GGESFLRTNYSLKYKLRWYGQDNTCEEYHTVGPHSCRVPKDLALFTPYEIWVEAANRLGS
ARSDVLTLDILDVVTTDPPPEVHVSRVGGLEDQLSVRWVSPPALKDFLFQAKYQIRYRVE
DSVDWKVVDDVSNQTSCRLAGLKPGTVYFVQVRCNPFGIYGSKKAGIWSEWSHPTAASTP
RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXDEGILPSSRRGTARGSA
Download sequence
Identical sequences ENSSARP00000011537 ENSSARP00000011537

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]